RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 C18orf12Q96KH6 178 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 TXLNGYQ9BZA5 131 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 STMN4Q9H169 189 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 DCDC2Q9UHG0 476 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 MRPS18CQ9Y3D5 142 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 A0A087WV62 115 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 CCDC151A5D8V7 595 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 TMEM233B4DJY2 109 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 PSMG1O95456 288 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 CGAP01215 116 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 INHBBP09529 407 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 LINC00032P0C843 101 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 MRPS22P82650 360 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 BCL2A1Q16548 175 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 TRIM46Q7Z4K8 759 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 GGNQ86UU5 652 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 P3H2Q8IVL5 708 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 EPS8L3Q8TE67 593 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 UBLCP1Q8WVY7 318 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 LMF2Q9BU23 707 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 PRRG4Q9BZD6 226 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 PTGES2Q9H7Z7 377 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 RNF122Q9H9V4 155 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 SDHAF3Q9NRP4 125 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 SH3BP4Q9P0V3 963 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 STK38LQ9Y2H1 464 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 CCL27Q9Y4X3 112 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 DSCAMO60469 2012 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 UQCRHLA0A096LP55 91 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 TRIM64A6NGJ6 449 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 TRIM64BA6NI03 449 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 H7C1Q1 480 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 GLRA3O75311 464 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 PLAUP00749 431 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 ACP2P11117 423 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 IL11P20809 199 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 KIAA0040Q15053 153 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 ZNHIT3Q15649 155 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 GALNTL6Q49A17 601 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 OR2A2Q6IF42 318 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 SH2D5Q6ZV89 423 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 C10orf107Q8IVU9 208 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 AGR3Q8TD06 166 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 ACMSDQ8TDX5 336 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 Q96MF0 132 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 CCL19Q99731 98 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 TUBB1Q9H4B7 451 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 C12orf49Q9H741 205 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 LRTM1Q9HBL6 345 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 BEX4Q9NWD9 120 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 FAM120CQ9NX05 1096 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 SIRT5Q9NXA8 310 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 GRID1Q9ULK0 1009 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 PROCRQ9UNN8 238 aa12.8□□□□□ -0.36
SMARCE1-205ENST00000431889 PRR14LQ5THK1 2151 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 NPIPA5A0A0B4J1W7 369 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 SERTM1A2A2V5 107 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 NPIPA7E9PJI5 369 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 TNFSF11O14788 317 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 PDPK1O15530 556 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 CXCL13O43927 109 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 PLIN3O60664 434 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 SMPD2O60906 423 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 TNFRSF21O75509 655 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 RSL1D1O76021 490 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 LY6G6DO95868 133 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 NPIPA8P0DM63 369 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 CPA3P15088 417 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 SDC1P18827 310 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 CLK3P49761 638 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 RPL38P63173 70 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 TSC22D1Q15714 1073 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 KRTAP21-3Q3LHN1 58 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 RFTN2Q52LD8 501 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 SLC16A11Q8NCK7 471 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 NUP43Q8NFH3 380 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 JADE3Q92613 823 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 ARSGQ96EG1 525 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 CHMP6Q96FZ7 201 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 RRAGDQ9NQL2 400 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 GIN1Q9NXP7 522 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 ZNF226Q9NYT6 803 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 ABCG2Q9UNQ0 655 aa12.79□□□□□ -0.36
SMARCE1-205ENST00000431889 C16orf97H3BN30 126 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 KCNH1O95259 989 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 OXSR1O95747 527 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 PLGP00747 810 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 THBDP07204 575 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 CHRNGP07510 517 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 UROSP10746 265 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 PRPS2P11908 318 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 FOSL1P15407 271 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 CRYGSP22914 178 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 PCSK6P29122 969 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 SHC1P29353 583 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 C17orf67Q0P5P2 114 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 ACKR1Q16570 336 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 DUSP5Q16690 384 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 Q6ZSR9 355 aa12.78□□□□□ -0.36
SMARCE1-205ENST00000431889 LCA5Q86VQ0 697 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms