RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 OPN1LWP04000 364 aa12.5□□□□□ -0.41
SEC13-211ENST00000431352 HEXAP06865 529 aa12.5□□□□□ -0.41
SEC13-211ENST00000431352 SLC6A8P48029 635 aa12.5□□□□□ -0.41
SEC13-211ENST00000431352 PSMD4P55036 377 aaKnown RBP12.5□□□□□ -0.41
SEC13-211ENST00000431352 ACKR1Q16570 336 aa12.5□□□□□ -0.41
SEC13-211ENST00000431352 GLE1Q53GS7 698 aaKnown RBP12.5□□□□□ -0.41
SEC13-211ENST00000431352 CFAP157Q5JU67 520 aa12.5□□□□□ -0.41
SEC13-211ENST00000431352 CLEC6AQ6EIG7 209 aa12.5□□□□□ -0.41
SEC13-211ENST00000431352 NOXRED1Q6NXP6 359 aa12.5□□□□□ -0.41
SEC13-211ENST00000431352 ZYG11AQ6WRX3 759 aa12.5□□□□□ -0.41
SEC13-211ENST00000431352 TRMT10CQ7L0Y3 403 aaKnown RBP12.5□□□□□ -0.41
SEC13-211ENST00000431352 YTHDF3Q7Z739 585 aaKnown RBP12.5□□□□□ -0.41
SEC13-211ENST00000431352 GSPT2Q8IYD1 628 aaKnown RBP12.5□□□□□ -0.41
SEC13-211ENST00000431352 CEP112Q8N8E3 955 aa12.5□□□□□ -0.41
SEC13-211ENST00000431352 ACMSDQ8TDX5 336 aa12.5□□□□□ -0.41
SEC13-211ENST00000431352 CIDECQ96AQ7 238 aaPredicted RBP12.5□□□□□ -0.41
SEC13-211ENST00000431352 TMEM185BQ9H7F4 350 aa12.5□□□□□ -0.41
SEC13-211ENST00000431352 TNFRSF12AQ9NP84 129 aa12.5□□□□□ -0.41
SEC13-211ENST00000431352 SIRT5Q9NXA8 310 aa12.5□□□□□ -0.41
SEC13-211ENST00000431352 ELOVL5Q9NYP7 299 aa12.5□□□□□ -0.41
SEC13-211ENST00000431352 FIS1Q9Y3D6 152 aa12.5□□□□□ -0.41
SEC13-211ENST00000431352 SERTM1A2A2V5 107 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 TRIM64A6NGJ6 449 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 TRIM64BA6NI03 449 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 LINC01387J3KSC0 135 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 AKAP10O43572 662 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 SEC22BO75396 215 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 RSL1D1O76021 490 aaKnown RBP12.49□□□□□ -0.41
SEC13-211ENST00000431352 FAM153BP0C7A2 387 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 CD8BP10966 210 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 FCGR2AP12318 317 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 FPR1P21462 350 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 PCSK6P29122 969 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 PRKAG1P54619 331 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 FGFBP1Q14512 234 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 SLC29A2Q14542 456 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 FAM153CQ494X1 144 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 ALKBH2Q6NS38 261 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 APOOLQ6UXV4 268 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 FRMD7Q6ZUT3 714 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 C22orf34Q6ZV56 151 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 IKBIPQ70UQ0 350 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 GGNQ86UU5 652 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 METTL25Q8N6Q8 603 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 CCDC63Q8NA47 563 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 CLHC1Q8NHS4 586 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.49□□□□□ -0.41
SEC13-211ENST00000431352 CCDC126Q96EE4 140 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 OTUB1Q96FW1 271 aaPredicted RBP12.49□□□□□ -0.41
SEC13-211ENST00000431352 SH3YL1Q96HL8 342 aaPredicted RBP12.49□□□□□ -0.41
SEC13-211ENST00000431352 COX4I2Q96KJ9 171 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 EGLN2Q96KS0 407 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 PIP5K1AQ99755 562 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 C3orf14Q9HBI5 128 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 RRAGDQ9NQL2 400 aaPredicted RBP12.49□□□□□ -0.41
SEC13-211ENST00000431352 EMC9Q9Y3B6 208 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 AP4B1Q9Y6B7 739 aa12.49□□□□□ -0.41
SEC13-211ENST00000431352 FN1P02751 2386 aaKnown RBP12.49□□□□□ -0.41
SEC13-211ENST00000431352 ARID1AO14497 2285 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 A0A1W2PPM1 405 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 SMIM23A6NLE4 172 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 GLRA3O75311 464 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 PROCP04070 461 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 EFNA1P20827 205 aaPredicted RBP12.48□□□□□ -0.41
SEC13-211ENST00000431352 TBXA2RP21731 343 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 CTBP2P56545 445 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 C17orf67Q0P5P2 114 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 FIGNL1Q6PIW4 674 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 FAM214BQ7L5A3 538 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 IFT20Q8IY31 132 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 LRRC75A-AS1Q8N1F1 130 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 OR10D3Q8NH80 312 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 FAM76AQ8TAV0 307 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 MZB1Q8WU39 189 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 NUDT8Q8WV74 236 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 MARK4Q96L34 752 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 NPAS1Q99742 590 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 RHOXF2Q9BQY4 288 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 C12orf65Q9H3J6 166 aaKnown RBP12.48□□□□□ -0.41
SEC13-211ENST00000431352 TAS2R7Q9NYW3 318 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 DCDC2Q9UHG0 476 aa12.48□□□□□ -0.41
SEC13-211ENST00000431352 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.47□□□□□ -0.41
SEC13-211ENST00000431352 FAM171A2A8MVW0 826 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 NDUFB5O43674 189 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 SYNGR4O95473 234 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 THBDP07204 575 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 ACP2P11117 423 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 PRPS2P11908 318 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 LOXP28300 417 aaPredicted RBP12.47□□□□□ -0.41
SEC13-211ENST00000431352 PCYT1AP49585 367 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 RNF144AP50876 292 aaPredicted RBP12.47□□□□□ -0.41
SEC13-211ENST00000431352 PRR5P85299 388 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 GUSBP1Q15486 140 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 GLYR1Q49A26 553 aaPredicted RBP12.47□□□□□ -0.41
SEC13-211ENST00000431352 ZNF385BQ569K4 471 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 C20orf204Q6ZNR8 217 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 TRIM46Q7Z4K8 759 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 ZAR1Q86SH2 424 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 WFDC8Q8IUA0 241 aa12.47□□□□□ -0.41
SEC13-211ENST00000431352 PPP1R14CQ8TAE6 165 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms