RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 GALNTL6Q49A17 601 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 APOOLQ6UXV4 268 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 BTLAQ7Z6A9 289 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 GATSQ8NAP1 163 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 ZFP28Q8NHY6 868 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 FNDC9Q8TBE3 224 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 SLC9A6Q92581 669 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 OTUB1Q96FW1 271 aaPredicted RBP15.39■□□□□ 0.05
TRIM39-209ENST00000428728 PGM2Q96G03 612 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 METTL2AQ96IZ6 378 aaKnown RBP15.39■□□□□ 0.05
TRIM39-209ENST00000428728 GATA5Q9BWX5 397 aaPredicted RBP15.39■□□□□ 0.05
TRIM39-209ENST00000428728 REEP4Q9H6H4 257 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 PPCSQ9HAB8 311 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 KLHL28Q9NXS3 571 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 C6orf203Q9P0P8 240 aaPredicted RBP15.39■□□□□ 0.05
TRIM39-209ENST00000428728 SH3BP4Q9P0V3 963 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 BAIAP2L1Q9UHR4 511 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 RAI1Q7Z5J4 1906 aaPredicted RBP15.39■□□□□ 0.05
TRIM39-209ENST00000428728 DSCAMO60469 2012 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 TTC36A6NLP5 189 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 TMEM233B4DJY2 109 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 CHEK2O96017 543 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 IFI6P09912 130 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 ACP2P11117 423 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 CCKARP32238 428 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 CD79BP40259 229 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 KIR2DL2P43627 348 aaPredicted RBP15.38■□□□□ 0.05
TRIM39-209ENST00000428728 MANFP55145 182 aaKnown RBP15.38■□□□□ 0.05
TRIM39-209ENST00000428728 EEFSECP57772 596 aaKnown RBP15.38■□□□□ 0.05
TRIM39-209ENST00000428728 PRR5P85299 388 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 C17orf67Q0P5P2 114 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 VPS26BQ4G0F5 336 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 FIGNL1Q6PIW4 674 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 Q6ZSR9 355 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 DDIASQ8IXT1 998 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 NUP43Q8NFH3 380 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 ZBED6CLQ96FA7 236 aaPredicted RBP15.38■□□□□ 0.05
TRIM39-209ENST00000428728 FCRL1Q96LA6 429 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 MS4A4EQ96PG1 132 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 IQCGQ9H095 443 aaKnown RBP15.38■□□□□ 0.05
TRIM39-209ENST00000428728 TUBB1Q9H4B7 451 aa15.38■□□□□ 0.05
TRIM39-209ENST00000428728 TLDC2A0PJX2 215 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 NPIPB8E9PQR5 432 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 LINC01387J3KSC0 135 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 LSM1O15116 133 aaKnown RBP15.37■□□□□ 0.05
TRIM39-209ENST00000428728 TRIM13O60858 407 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 TNFRSF21O75509 655 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 NKX2-2O95096 273 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 OXSR1O95747 527 aaPredicted RBP15.37■□□□□ 0.05
TRIM39-209ENST00000428728 CHRNGP07510 517 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 POU2F1P14859 743 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 KCNJ5P48544 419 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 RPS3AP61247 264 aaKnown RBP15.37■□□□□ 0.05
TRIM39-209ENST00000428728 SLC18A2Q05940 514 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 SGCBQ16585 318 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 RFTN2Q52LD8 501 aaPredicted RBP15.37■□□□□ 0.05
TRIM39-209ENST00000428728 KANK2Q63ZY3 851 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 ZNF474Q6S9Z5 364 aaPredicted RBP15.37■□□□□ 0.05
TRIM39-209ENST00000428728 EIF1ADQ8N9N8 165 aaKnown RBP15.37■□□□□ 0.05
TRIM39-209ENST00000428728 CDRT4Q8N9R6 151 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 WFDC11Q8NEX6 87 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 OR2W6PQ8NHA6 318 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 AGR3Q8TD06 166 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 JADE3Q92613 823 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 ZNF764Q96H86 408 aaPredicted RBP15.37■□□□□ 0.05
TRIM39-209ENST00000428728 APOPT1Q96IL0 206 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 WFIKKN1Q96NZ8 548 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 MED18Q9BUE0 208 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 MECRQ9BV79 373 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 RNF122Q9H9V4 155 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 ZNF175Q9Y473 711 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 DNAJC15Q9Y5T4 150 aa15.37■□□□□ 0.05
TRIM39-209ENST00000428728 FLNAP21333 2647 aaKnown RBP15.37■□□□□ 0.05
TRIM39-209ENST00000428728 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 UQCRHLA0A096LP55 91 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 IGLV3-32A0A0A0MS00 114 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 EIF1AYO14602 144 aaKnown RBP15.36■□□□□ 0.05
TRIM39-209ENST00000428728 SIAH2O43255 324 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 NDUFB5O43674 189 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 AQP8O94778 261 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 CD53P19397 219 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 EIF1AXP47813 144 aaKnown RBP15.36■□□□□ 0.05
TRIM39-209ENST00000428728 PDE7AQ13946 482 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 DUSP5Q16690 384 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 MFSD12Q6NUT3 480 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 ZNF550Q7Z398 422 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 ZAR1Q86SH2 424 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 GGNQ86UU5 652 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 METTL25Q8N6Q8 603 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 SLC16A11Q8NCK7 471 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 OR4C3Q8NH37 302 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 CEP70Q8NHQ1 597 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 TWIST2Q8WVJ9 160 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 HOXB13Q92826 284 aaPredicted RBP15.36■□□□□ 0.05
TRIM39-209ENST00000428728 GIMAP5Q96F15 307 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 CHMP6Q96FZ7 201 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 ZC3HAV1LQ96H79 300 aaKnown RBP15.36■□□□□ 0.05
TRIM39-209ENST00000428728 POM121Q96HA1 1249 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 SH3YL1Q96HL8 342 aaPredicted RBP15.36■□□□□ 0.05
TRIM39-209ENST00000428728 TRMOQ9BU70 441 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms