RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 PTPN6P29350 595 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 TMEM181Q9P2C4 612 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 J3QR89 54 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 WDPCPO95876 746 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 TK1P04183 234 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 IL4RP24394 825 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 GDF5P43026 501 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 VEZF1Q14119 521 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 GRM7Q14831 915 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 ZNF585AQ6P3V2 769 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 OR4N5Q8IXE1 308 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 SPARTQ8N0X7 666 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 BMXP51813 675 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 GPR17Q13304 367 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.69□□□□□ -0.22
PTPN13-203ENST00000427191 UBL7Q96S82 380 aaPredicted RBP13.69□□□□□ -0.22
PTPN13-203ENST00000427191 SCML1Q9UN30 329 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 ANKRD30BLA7E2S9 258 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 RPL35P42766 123 aaKnown RBP13.69□□□□□ -0.22
PTPN13-203ENST00000427191 MFGE8Q08431 387 aaPredicted RBP13.69□□□□□ -0.22
PTPN13-203ENST00000427191 UBE2UQ5VVX9 321 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 C3orf58Q8NDZ4 430 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 SMCO4Q9NRQ5 59 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 SACM1LQ9NTJ5 587 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 MON2Q7Z3U7 1717 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 CCDC163A0A0D9SF12 145 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 SERPINF1P36955 418 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 ERVK-25P63136 954 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 GRIN2CQ14957 1233 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 TRAV18A0A075B6X5 111 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 NPIPA7E9PJI5 369 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 NPIPA8P0DM63 369 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 FIGNL1Q6PIW4 674 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 PAPD4Q6PIY7 484 aaKnown RBP13.68□□□□□ -0.22
PTPN13-203ENST00000427191 MRPL21Q7Z2W9 205 aaKnown RBP13.68□□□□□ -0.22
PTPN13-203ENST00000427191 SERPINA11Q86U17 422 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 ZNF679Q8IYX0 411 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 GLOD5A6NK44 160 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 NRP1O14786 923 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 MLLT10P55197 1068 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 FAM182AQ5T1J6 154 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 TMEM244Q5VVB8 128 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 BBS1Q8NFJ9 593 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 POT1Q9NUX5 634 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 SLC17A6Q9P2U8 582 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 A0A0U1RQF3 1178 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 ZNF705GA8MUZ8 300 aaPredicted RBP13.68□□□□□ -0.22
PTPN13-203ENST00000427191 KCNK5O95279 499 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 GCH1P30793 250 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 PDLIM3Q53GG5 364 aaPredicted RBP13.68□□□□□ -0.22
PTPN13-203ENST00000427191 GDF6Q6KF10 455 aaPredicted RBP13.68□□□□□ -0.22
PTPN13-203ENST00000427191 LACC1Q8IV20 430 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 ECHDC3Q96DC8 303 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 CFAP20Q9Y6A4 193 aaKnown RBP13.68□□□□□ -0.22
PTPN13-203ENST00000427191 MTMR11A4FU01 709 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 EVI2BP34910 448 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 HYAL2Q12891 473 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 LPCAT3Q6P1A2 487 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 NAA40Q86UY6 237 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 OR4M1Q8NGD0 313 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 OR5D16Q8NGK9 328 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 SIGLEC10Q96LC7 697 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 THAP7Q9BT49 309 aaPredicted RBP13.68□□□□□ -0.22
PTPN13-203ENST00000427191 MKRN2Q9H000 416 aaKnown RBP13.68□□□□□ -0.22
PTPN13-203ENST00000427191 LIN28AQ9H9Z2 209 aaKnown RBP13.68□□□□□ -0.22
PTPN13-203ENST00000427191 GPR83Q9NYM4 423 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 CPNE7Q9UBL6 633 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 INSL5Q9Y5Q6 135 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 SMIM30A4D0T7 59 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 B4DXG7 233 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 H3BSH0 61 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 OR7A17O14581 309 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 SCO2O43819 266 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 PPP1R11O60927 126 aaPredicted RBP13.68□□□□□ -0.22
PTPN13-203ENST00000427191 EFNA3P52797 238 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 ARHGAP1Q07960 439 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 CARD17Q5XLA6 110 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 UBXN10Q96LJ8 280 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 LMF2Q9BU23 707 aaKnown RBP13.68□□□□□ -0.22
PTPN13-203ENST00000427191 SERTAD4Q9NUC0 356 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 SDHDO14521 159 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 ONECUT3O60422 494 aaPredicted RBP13.68□□□□□ -0.22
PTPN13-203ENST00000427191 PRKACBP22694 351 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 RPS5P46782 204 aaKnown RBP13.68□□□□□ -0.22
PTPN13-203ENST00000427191 RDH14Q9HBH5 336 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 ACTR10Q9NZ32 417 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 PHLPP1O60346 1717 aa13.68□□□□□ -0.22
PTPN13-203ENST00000427191 RNASET2O00584 256 aaKnown RBP13.67□□□□□ -0.22
PTPN13-203ENST00000427191 MTX2O75431 263 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 BEST1O76090 585 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 GBAP04062 536 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 NR0B1P51843 470 aaKnown RBP13.67□□□□□ -0.22
PTPN13-203ENST00000427191 ADARB1P78563 741 aaKnown RBP13.67□□□□□ -0.22
PTPN13-203ENST00000427191 KRTCAP2Q8N6L1 136 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 SGK3Q96BR1 496 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 SLC2A13Q96QE2 648 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 SYT17Q9BSW7 474 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 HCAR1Q9BXC0 346 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 SLC2A6Q9UGQ3 507 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 DPM1O60762 260 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms