RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 FAM174BQ3ZCQ3 159 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 NHSL2Q5HYW2 709 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 VASNQ6EMK4 673 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 CDC73Q6P1J9 531 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 AAGABQ6PD74 315 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 FIGNL1Q6PIW4 674 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 NCCRP1Q6ZVX7 275 aaPredicted RBP9.96□□□□□ -0.82
USP49-204ENST00000423567 GALNT10Q86SR1 603 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 MARCH3Q86UD3 253 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 ULK2Q8IYT8 1036 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 CLECL1Q8IZS7 167 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 GLB1L3Q8NCI6 653 aaPredicted RBP9.96□□□□□ -0.82
USP49-204ENST00000423567 OR5AK3PQ8NH89 298 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 ACTRT2Q8TDY3 377 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 NUDT8Q8WV74 236 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 RNF138Q8WVD3 245 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 C7orf26Q96N11 449 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 SFXN2Q96NB2 322 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 TIMP4Q99727 224 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 UGT2B28Q9BY64 529 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 DSN1Q9H410 356 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 PIGUQ9H490 435 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 INTS9Q9NV88 658 aaKnown RBP9.96□□□□□ -0.82
USP49-204ENST00000423567 FBXL2Q9UKC9 423 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 HRH3Q9Y5N1 445 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 USH1CQ9Y6N9 552 aa9.96□□□□□ -0.82
USP49-204ENST00000423567 SPTBN1Q01082 2364 aaKnown RBP9.96□□□□□ -0.82
USP49-204ENST00000423567 RNF103-CHMP3A0A140T963 221 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 SCDO00767 359 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 ANKRD28O15084 1053 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 UBDO15205 165 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 NDUFB5O43674 189 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 ANGPTL1O95841 491 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 IGKV1D-16P01601 117 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 NGFRP08138 427 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 ALDOCP09972 364 aaKnown RBP9.95□□□□□ -0.82
USP49-204ENST00000423567 BMP7P18075 431 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 TBXA2RP21731 343 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 MATN1P21941 496 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 UQCRC2P22695 453 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 COL8A1P27658 744 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 CHRNB4P30926 498 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 GAS1P54826 345 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 NUP107P57740 925 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 UFM1P61960 85 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 RCAN2Q14206 197 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 GANABQ14697 944 aaKnown RBP9.95□□□□□ -0.82
USP49-204ENST00000423567 ZNF630Q2M218 657 aaPredicted RBP9.95□□□□□ -0.82
USP49-204ENST00000423567 SLC9B1Q4ZJI4 515 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 SPANXN4Q5MJ08 99 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 C6orf120Q7Z4R8 191 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 ANKRD46Q86W74 232 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 RPRMLQ8N4K4 120 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 MARVELD2Q8N4S9 558 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 TRIML2Q8N7C3 387 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 ZNF527Q8NB42 609 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 FAM110BQ8TC76 370 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 DUSP19Q8WTR2 217 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 CDS1Q92903 461 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 OTUB1Q96FW1 271 aaPredicted RBP9.95□□□□□ -0.82
USP49-204ENST00000423567 SLC35G5Q96KT7 338 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 TTYH2Q9BSA4 534 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 PRDM14Q9GZV8 571 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 HOXD1Q9GZZ0 328 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 UBQLN4Q9NRR5 601 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 GPATCH2Q9NW75 528 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 FLRT3Q9NZU0 649 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 RNF6Q9Y252 685 aa9.95□□□□□ -0.82
USP49-204ENST00000423567 MRPS18CQ9Y3D5 142 aaKnown RBP9.95□□□□□ -0.82
USP49-204ENST00000423567 DIDO1Q9BTC0 2240 aaKnown RBP9.95□□□□□ -0.82
USP49-204ENST00000423567 MYO7BQ6PIF6 2116 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 ALG1L2C9J202 215 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 H0Y3Z8 333 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 H3BNH8 94 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 POLR3GO15318 223 aaPredicted RBP9.94□□□□□ -0.82
USP49-204ENST00000423567 SLC22A3O75751 556 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 TGDSO95455 350 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 OXSR1O95747 527 aaPredicted RBP9.94□□□□□ -0.82
USP49-204ENST00000423567 AGR2O95994 175 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 AK1P00568 194 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 GLI4P10075 376 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 HK1P19367 917 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 TCEA1P23193 301 aaKnown RBP9.94□□□□□ -0.82
USP49-204ENST00000423567 CHI3L1P36222 383 aaPredicted RBP9.94□□□□□ -0.82
USP49-204ENST00000423567 DCTP40126 519 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 ZFP36L2P47974 494 aaKnown RBP9.94□□□□□ -0.82
USP49-204ENST00000423567 WNT3P56703 355 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 STX1BP61266 288 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 GSTA3Q16772 222 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 PDCD4Q53EL6 469 aaKnown RBP9.94□□□□□ -0.82
USP49-204ENST00000423567 EXOSC6Q5RKV6 272 aaKnown RBP9.94□□□□□ -0.82
USP49-204ENST00000423567 DCST2Q5T1A1 773 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 CCNJQ5T5M9 372 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 ATAD3BQ5T9A4 648 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 RAET1LQ5VY80 246 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 SP5Q6BEB4 398 aaPredicted RBP9.94□□□□□ -0.82
USP49-204ENST00000423567 HIST2H2BCQ6DN03 193 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 RTL6Q6ICC9 239 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 RETREG3Q86VR2 466 aa9.94□□□□□ -0.82
USP49-204ENST00000423567 LACC1Q8IV20 430 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms