RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 CLIC1O00299 241 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 HMGN4O00479 90 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 COL8A1P27658 744 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 MASP1P48740 699 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 MVDP53602 400 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 MAPRE2Q15555 327 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 GRAMD1BQ3KR37 738 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 GTDC1Q4AE62 458 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 ZNF787Q6DD87 383 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 DLEU7Q6UYE1 221 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 C16orf62Q7Z3J2 963 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 PIGWQ7Z7B1 504 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 ZAR1Q86SH2 424 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 GALNT10Q86SR1 603 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 FAM109AQ8N4B1 249 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 TMEM251Q8N6I4 163 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 OR52N2Q8NGI0 321 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 OR1J4Q8NGS1 313 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 RAB8BQ92930 207 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 RAD21L1Q9H4I0 556 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 HHATLQ9HCP6 504 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 THUMPD1Q9NXG2 353 aaKnown RBP17.11■□□□□ 0.33
MCF2L-214ENST00000423251 SLC25A37Q9NYZ2 338 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 SLAMF8Q9P0V8 285 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 B4GALT7Q9UBV7 327 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 SEC14L3Q9UDX4 400 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 LIPT1Q9Y234 373 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 WIF1Q9Y5W5 379 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 DOPEY1Q5JWR5 2465 aa17.11■□□□□ 0.33
MCF2L-214ENST00000423251 TRBV5-3A0A0A0MS03 114 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 FAM166BA8MTA8 275 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 ALG1L2C9J202 215 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 SNPHO15079 494 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 STX11O75558 287 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 WISP2O76076 250 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 UNC5CO95185 931 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 RFPL3SP0C7P2 107 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 PPIBP23284 216 aaKnown RBP17.1■□□□□ 0.33
MCF2L-214ENST00000423251 SLC10A1Q14973 349 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 CMPK2Q5EBM0 449 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 COX20Q5RI15 118 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 MTDHQ86UE4 582 aaKnown RBP17.1■□□□□ 0.33
MCF2L-214ENST00000423251 RETREG3Q86VR2 466 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 WDSUB1Q8N9V3 476 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 PNPT1Q8TCS8 783 aaKnown RBP17.1■□□□□ 0.33
MCF2L-214ENST00000423251 GNRHR2Q96P88 292 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 TBL1XR1Q9BZK7 514 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 TSPAN10Q9H1Z9 355 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-214ENST00000423251 ZNF703Q9H7S9 590 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-214ENST00000423251 POLE3Q9NRF9 147 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 VAPAQ9P0L0 249 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 ADAM21Q9UKJ8 722 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 CAPN7Q9Y6W3 813 aa17.1■□□□□ 0.33
MCF2L-214ENST00000423251 A0A1W2PQD3 144 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 C2orf72A6NCS6 295 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 ANKUB1A6NFN9 424 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 ADAM10O14672 748 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 GNB5O14775 395 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 CBR3O75828 277 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 OXSR1O95747 527 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-214ENST00000423251 CLDN1O95832 211 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 LDLRP01130 860 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 HPGDP15428 266 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 MAGEA5P43359 124 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 ATP12AP54707 1039 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 C17orf67Q0P5P2 114 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 COQ5Q5HYK3 327 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.09■□□□□ 0.331e-7■■■■□ 26.4
MCF2L-214ENST00000423251 APOOLQ6UXV4 268 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 MAMDC2Q7Z304 686 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-214ENST00000423251 PLCZ1Q86YW0 608 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 MSRB3Q8IXL7 192 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 GHDCQ8N2G8 530 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 ZNF527Q8NB42 609 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 ROPN1LQ96C74 230 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 AURKBQ96GD4 344 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-214ENST00000423251 TRNT1Q96Q11 434 aaKnown RBP17.09■□□□□ 0.33
MCF2L-214ENST00000423251 CCT8L2Q96SF2 557 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 DEFB127Q9H1M4 99 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 UBQLN3Q9H347 655 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 ACKR4Q9NPB9 350 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 PLSCR2Q9NRY7 297 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 C15orf41Q9Y2V0 281 aa17.09■□□□□ 0.33
MCF2L-214ENST00000423251 BBIP1A8MTZ0 92 aa17.08■□□□□ 0.32
MCF2L-214ENST00000423251 NPIPB9F8W1W9 429 aa17.08■□□□□ 0.32
MCF2L-214ENST00000423251 FBP2O00757 339 aa17.08■□□□□ 0.32
MCF2L-214ENST00000423251 SCDO00767 359 aa17.08■□□□□ 0.32
MCF2L-214ENST00000423251 SCO2O43819 266 aa17.08■□□□□ 0.32
MCF2L-214ENST00000423251 FCMRO60667 390 aa17.08■□□□□ 0.32
MCF2L-214ENST00000423251 SHOX2O60902 331 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-214ENST00000423251 NPPAP01160 153 aa17.08■□□□□ 0.32
MCF2L-214ENST00000423251 IGHG3P01860 377 aa17.08■□□□□ 0.32
MCF2L-214ENST00000423251 CRATP43155 626 aa17.08■□□□□ 0.32
MCF2L-214ENST00000423251 FADDQ13158 208 aa17.08■□□□□ 0.32
MCF2L-214ENST00000423251 STX5Q13190 355 aa17.08■□□□□ 0.32
MCF2L-214ENST00000423251 CYLC2Q14093 348 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-214ENST00000423251 ELOAQ14241 798 aaKnown RBP17.08■□□□□ 0.32
MCF2L-214ENST00000423251 RGNQ15493 299 aa17.08■□□□□ 0.32
MCF2L-214ENST00000423251 FLYWCH1Q4VC44 716 aa17.08■□□□□ 0.32
MCF2L-214ENST00000423251 RUNDC3AQ59EK9 446 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms