RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 TMEM168Q9H0V1 697 aa11.88□□□□□ -0.51
CTCFL-204ENST00000422869 IL21Q9HBE4 155 aa11.88□□□□□ -0.51
CTCFL-204ENST00000422869 NLGN3Q9NZ94 848 aa11.88□□□□□ -0.51
CTCFL-204ENST00000422869 NFKBIL1Q9UBC1 381 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-204ENST00000422869 LSM7Q9UK45 103 aaKnown RBP11.88□□□□□ -0.51
CTCFL-204ENST00000422869 PPIEQ9UNP9 301 aaKnown RBP11.88□□□□□ -0.51
CTCFL-204ENST00000422869 ENTPD4Q9Y227 616 aa11.88□□□□□ -0.51
CTCFL-204ENST00000422869 DENND4CQ5VZ89 1909 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 CPSF4LA6NMK7 179 aaKnown RBP11.87□□□□□ -0.51
CTCFL-204ENST00000422869 SSNA1O43805 119 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 MT-ND4P03905 459 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 UGT2B7P16662 529 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 ZP3P21754 424 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 IFNGR2P38484 337 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 RAG2P55895 527 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 PGGHGQ32M88 737 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 PRAMEF14Q5SWL7 426 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 PRAMEF13Q5VWM6 474 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 HTR3DQ70Z44 454 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 BTN2A1Q7KYR7 527 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 NLRC3Q7RTR2 1065 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 FTMTQ8N4E7 242 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 LSM14AQ8ND56 463 aaKnown RBP11.87□□□□□ -0.51
CTCFL-204ENST00000422869 POF1BQ8WVV4 589 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 ZFPM2Q8WW38 1151 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 OSTF1Q92882 214 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 ZNF689Q96CS4 500 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-204ENST00000422869 AHCYL2Q96HN2 611 aaKnown RBP11.87□□□□□ -0.51
CTCFL-204ENST00000422869 YIPF4Q9BSR8 244 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 MS4A8Q9BY19 250 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 METTL17Q9H7H0 456 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-204ENST00000422869 BEX1Q9HBH7 125 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 MED17Q9NVC6 651 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 ZC3H12DA2A288 527 aaKnown RBP11.87□□□□□ -0.51
CTCFL-204ENST00000422869 PEPDP12955 493 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 TRHRP34981 398 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-204ENST00000422869 GPR4P46093 362 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 MMP15P51511 669 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 NHLRC3Q5JS37 347 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 GARNL3Q5VVW2 1013 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 TPGS2Q68CL5 300 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 ARSKQ6UWY0 536 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 WASH2PQ6VEQ5 465 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 KANSL1Q7Z3B3 1105 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 CPOQ8IVL8 374 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 CMIPQ8IY22 773 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 OR51Q1Q8NH59 317 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 HAVCR2Q8TDQ0 301 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 RIT1Q92963 219 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 COQ10AQ96MF6 247 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 ZNF578Q96N58 590 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-204ENST00000422869 NRTNQ99748 197 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 ALG8Q9BVK2 526 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 SPATA5L1Q9BVQ7 753 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 GLIPR2Q9H4G4 154 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 ACSS1Q9NUB1 689 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-204ENST00000422869 ZCCHC3Q9NUD5 404 aaKnown RBP11.87□□□□□ -0.51
CTCFL-204ENST00000422869 PLAGL1Q9UM63 463 aa11.87□□□□□ -0.51
CTCFL-204ENST00000422869 TCF20Q9UGU0 1960 aaKnown RBP11.86□□□□□ -0.51
CTCFL-204ENST00000422869 CXorf51AA0A1B0GTR3 108 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 hCG_1807616A0A1W2PRN6 198 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 E9PI62 339 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 LILRB5O75023 590 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 FPR3P25089 353 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 FKBP1BP68106 108 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 BTN1A1Q13410 526 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 TRAM2Q15035 370 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 TMEM99Q8N816 258 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 ZNF527Q8NB42 609 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 SUN3Q8TAQ9 357 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 DACT3Q96B18 629 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-204ENST00000422869 AMDHD1Q96NU7 426 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 TBX5Q99593 518 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 PINK1Q9BXM7 581 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 POLMQ9NP87 494 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-204ENST00000422869 KIF25Q9UIL4 384 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 SLC25A13Q9UJS0 675 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 CLEC4AQ9UMR7 237 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 MFSD2BA6NFX1 497 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 KLF4O43474 513 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 LEFTY1O75610 366 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 WNT1P04628 370 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 CKMP06732 381 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 TIMP2P16035 220 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 IL32P24001 234 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 CST5P28325 142 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-204ENST00000422869 LCN1P31025 176 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 GPNMBQ14956 572 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 MLC1Q15049 377 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 TCTN1Q2MV58 587 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 TUSC1Q2TAM9 212 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 ZNF620Q6ZNG0 422 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 NPAS4Q8IUM7 802 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 NKAIN4Q8IVV8 208 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 CRIPAKQ8N1N5 446 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 ACBD7Q8N6N7 88 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 AMER3Q8N944 861 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 UXS1Q8NBZ7 420 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 OR5W2Q8NH69 310 aa11.86□□□□□ -0.51
CTCFL-204ENST00000422869 RPLP0P6Q8NHW5 317 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms