RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 A4GALTQ9NPC4 353 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 NMRK2Q9NPI5 230 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 EPHA6Q9UF33 1036 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 TINAGQ9UJW2 476 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 MRTO4Q9UKD2 239 aaKnown RBP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 TRAV20A0A0B4J274 112 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 A0A1B0GW55 424 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 CHURC1-FNTBB4DL54 471 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 DUX4L2P0CJ85 424 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 DUX4L3P0CJ86 424 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 DUX4L4P0CJ87 422 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 DUX4L5P0CJ88 424 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 DUX4L6P0CJ89 424 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 DUX4L7P0CJ90 424 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 RAB3BP20337 219 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 PSMA6P60900 246 aaKnown RBP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 RPS24P62847 133 aaKnown RBP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 SEMG2Q02383 582 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 FAM27D1Q5T7N8 215 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 AADACL4Q5VUY2 407 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 SFRP4Q6FHJ7 346 aaPredicted RBP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 GLDNQ6ZMI3 551 aaPredicted RBP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 OR6V1Q8N148 313 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 MORN4Q8NDC4 146 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 OR1M1Q8NGA1 313 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 TMEM19Q96HH6 336 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 MAN2C1Q9NTJ4 1040 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 DUX4Q9UBX2 424 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 SIRT4Q9Y6E7 314 aaPredicted RBP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 CTDSPLO15194 276 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 SNAI1O95863 264 aaPredicted RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 CD160O95971 181 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 IFNA4P05014 189 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 TYMPP19971 482 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 RORAP35398 523 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 RPL3P39023 403 aaKnown RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 GDNFP39905 211 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 ARF5P84085 180 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 MRPL58Q14197 206 aaKnown RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 SLC25A35Q3KQZ1 300 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 SPOUT1Q5T280 376 aaKnown RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 BAIAP2L2Q6UXY1 529 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 SLC9B2Q86UD5 537 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 VRK3Q8IV63 474 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 PXT1Q8NFP0 134 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 SP7Q8TDD2 431 aaPredicted RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 WDR89Q96FK6 387 aaPredicted RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 OR10A4Q9H209 315 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 SLC25A32Q9H2D1 315 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 ISG20L2Q9H9L3 353 aaKnown RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 ADARB2Q9NS39 739 aaKnown RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 LHX3Q9UBR4 397 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 CAMK2AQ9UQM7 478 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 CHD7Q9P2D1 2997 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 A0A1W2PRB8 838 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 OR6C75A6NL08 312 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 F8W810 466 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 SLC16A5O15375 505 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 RHOCP08134 193 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 MST1P26927 711 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 RAD52P43351 418 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 GDI2P50395 445 aaKnown RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 CCR8P51685 355 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 MICBQ29980 383 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 TMEM44Q2T9K0 475 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 UAP1L1Q3KQV9 507 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 ELFN2Q5R3F8 820 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 LINGO4Q6UY18 593 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 THOC6Q86W42 341 aaKnown RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 CCDC36Q8IYA8 594 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 MEIOBQ8N635 442 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 FBXO32Q969P5 355 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 INTS12Q96CB8 462 aaKnown RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 ORAI1Q96D31 301 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 SUSD3Q96L08 255 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 PITHD1Q9GZP4 211 aaPredicted RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 BACE2Q9Y5Z0 518 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 DOCK6Q96HP0 2047 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 ARPC1BO15143 372 aaKnown RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 PGRMC2O15173 223 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 POMCP01189 267 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 FABP1P07148 127 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 MPC1LP0DKB6 136 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 ACP5P13686 325 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 UQCRC2P22695 453 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 GRK4P32298 578 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 CCR9P51686 369 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 SLC25A25Q6KCM7 469 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 KIAA1161Q6NSJ0 714 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 TMEM17Q86X19 198 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 BPIFCQ8NFQ6 507 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 SORCS1Q8WY21 1168 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 PAWRQ96IZ0 340 aaKnown RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 FNDC11Q9BVV2 318 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 GSDMCQ9BYG8 508 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 ANKRD19PQ9H560 264 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 AUNIPQ9H7T9 357 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 HRASLSQ9HDD0 168 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF69Q9UC07 566 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 CLEC4AQ9UMR7 237 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms