RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 CAPZA2P47755 286 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 TOB1P50616 345 aaPredicted RBP5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 RENBPP51606 427 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 TKTL1P51854 596 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 TAS2R60P59551 318 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 DEFA1P59665 94 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 DEFA3P59666 94 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 KIAA1024LP59773 190 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 IFI35P80217 286 aaPredicted RBP5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 RGS1Q08116 209 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 STX5Q13190 355 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 PRKG2Q13237 762 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 BOP1Q14137 746 aaKnown RBP5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 SLC29A2Q14542 456 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 CCNG2Q16589 344 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 TMEM44Q2T9K0 475 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 FAM98BQ52LJ0 330 aaKnown RBP5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 MS4A13Q5J8X5 152 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 CLLU1Q5K131 121 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 FAM69BQ5VUD6 431 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 METRNLQ641Q3 311 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 LRRC66Q68CR7 880 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 PWWP2BQ6NUJ5 590 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 TMEM81Q6P7N7 255 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 PAPD4Q6PIY7 484 aaKnown RBP5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 PRSS57Q6UWY2 283 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 ZDHHC24Q6UX98 284 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 BBS12Q6ZW61 710 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 VPS13CQ709C8 3753 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 GALNT10Q86SR1 603 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 LINC00523Q86TU6 105 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 EPHX4Q8IUS5 362 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 TIGD4Q8IY51 512 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 SYCE1Q8N0S2 351 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 LRRC75A-AS1Q8N1F1 130 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 SIX6OS1Q8N1H7 587 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 CYP4Z2PQ8N1L4 340 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 AVL9Q8NBF6 648 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 CAMKVQ8NCB2 501 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 OR5B17Q8NGF7 314 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 PSMA8Q8TAA3 256 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 ELP5Q8TE02 316 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 CXorf40AQ8TE69 158 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 RNF139Q8WU17 664 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 ASB5Q8WWX0 329 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 ST8SIA2Q92186 375 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 FBXL8Q96CD0 374 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 LRRC39Q96DD0 335 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 PGAP3Q96FM1 320 aaPredicted RBP5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 NSMCE2Q96MF7 247 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 SMYD3Q9H7B4 428 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 COG4Q9H9E3 785 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 KCNJ16Q9NPI9 418 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 EQTNQ9NQ60 294 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 BIN3Q9NQY0 253 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 ABCC13Q9NSE7 274 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 COX16Q9P0S2 106 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 PCYOX1Q9UHG3 505 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 KLHL21Q9UJP4 597 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 ZNF229Q9UJW7 825 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 USP22Q9UPT9 525 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 ZNF835Q9Y2P0 537 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 NUBP2Q9Y5Y2 271 aa5.1□□□□□ -1.59
ECHDC1-206ENST00000417628 TRPM6Q9BX84 2022 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 PRSS51A0A1B0GVH4 220 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 A6NNC1 897 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 PDZK1P1A8MUH7 402 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 MPTX1A8MV57 137 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 PEX12O00623 359 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 DNALI1O14645 258 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 HCRTR2O43614 444 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 AKAP8O43823 692 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 KLK8O60259 260 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 SOCS5O75159 536 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 NDUFS6O75380 124 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 MFN2O95140 757 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 CTDNEP1O95476 244 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 IFNA10P01566 189 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 IGLV3-27P01718 113 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 IGHV2-70P01814 119 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 APOA1P02647 267 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 POLBP06746 335 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 SERPINA6P08185 405 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 CLUP10909 449 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 SPI1P17947 270 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 CD58P19256 250 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 TFEBP19484 476 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 TCN1P20061 433 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 TNFAIP3P21580 790 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 MYF6P23409 242 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 EEF1DP29692 281 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 CHRNB4P30926 498 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 OTX2P32243 289 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 FOXN2P32314 431 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 MCM7P33993 719 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 GALNSP34059 522 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 CPOXP36551 454 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 PRKCIP41743 596 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 ACTR1BP42025 376 aa5.09□□□□□ -1.59
ECHDC1-206ENST00000417628 SLC1A3P43003 542 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms