RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 TRIM15Q9C019 465 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ZNF71Q9NQZ8 489 aaPredicted RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 UBQLN4Q9NRR5 601 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 KLHL28Q9NXS3 571 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 TAS2R1Q9NYW7 299 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 PPP4R1LQ9P1A2 415 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 TMEM181Q9P2C4 612 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 MAGEL2Q9UJ55 1249 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 TUBD1Q9UJT1 453 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 PACSIN3Q9UKS6 424 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 IFT52Q9Y366 437 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 GMEB1Q9Y692 573 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 MED13Q9UHV7 2174 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 PRORSD1PA6NEY8 169 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 G3V3Y1 287 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 KLRC4-KLRK1H3BQV0 150 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ERVH48-1M5A8F1 160 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ACOT7O00154 380 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 CXCR6O00574 342 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 OXSR1O95747 527 aaPredicted RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 NUDT14O95848 222 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 IGKV1D-16P01601 117 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 DBIP07108 87 aaKnown RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 CHRM4P08173 479 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 TFPTP0C1Z6 253 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 BMP2P12643 396 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 UQCRBP14927 111 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ENDOUP21128 410 aaKnown RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ME2P23368 584 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 MAP3K8P41279 467 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 MVDP53602 400 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ATP12AP54707 1039 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 NCALDP61601 193 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 CHRNEQ04844 493 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 BNIP2Q12982 314 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ZNF169Q14929 603 aaPredicted RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ZNF791Q3KP31 576 aaPredicted RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 GRAMD1BQ3KR37 738 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 SPATS1Q496A3 300 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 EIPR1Q53HC9 387 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ZNF311Q5JNZ3 666 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 PDZK1Q5T2W1 519 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 PRAMEF8Q5VWM4 474 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 PRAMEF7Q5VXH5 474 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 SPINK14Q6IE38 97 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 TYW3Q6IPR3 259 aaKnown RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 SLC25A25Q6KCM7 469 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 HEPHL1Q6MZM0 1159 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 SLC30A6Q6NXT4 461 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 FRRS1Q6ZNA5 592 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ZNF771Q7L3S4 317 aaPredicted RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 OLIG3Q7RTU3 272 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 NET1Q7Z628 596 aaPredicted RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 HMGN2P46Q86SG4 172 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ARMC8Q8IUR7 673 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ARMC10Q8N2F6 343 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 FBXW8Q8N3Y1 598 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 TEX19Q8NA77 164 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 GATSQ8NAP1 163 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 OR4K17Q8NGC6 315 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 OR52P1PQ8NH57 321 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 PHOSPHO1Q8TCT1 267 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 RASSF5Q8WWW0 418 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 LZICQ8WZA0 190 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 HOXB13Q92826 284 aaPredicted RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 PMM1Q92871 262 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ZNF597Q96LX8 424 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ZNF583Q96ND8 569 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 SIGLEC12Q96PQ1 595 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 RAB3IPQ96QF0 476 aaPredicted RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 NODALQ96S42 347 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 SECISBP2Q96T21 854 aaKnown RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 TREX2Q9BQ50 279 aaPredicted RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ZNF350Q9GZX5 532 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 MTHFD2LQ9H903 347 aaPredicted RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ADPRHL2Q9NX46 363 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ABCD2Q9UBJ2 740 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 B4GALT7Q9UBV7 327 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 EGFL7Q9UHF1 273 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 BOKQ9UMX3 212 aaPredicted RBP7.78□□□□□ -1.16
TRIM48-201ENST00000417545 ABCG2Q9UNQ0 655 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 DTNAQ9Y4J8 743 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 PCDHGA10Q9Y5H3 936 aa7.78□□□□□ -1.16
TRIM48-201ENST00000417545 GNB5O14775 395 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 GMFGO60234 142 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 KIAA0513O60268 411 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 FCMRO60667 390 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 ZNF354AO60765 605 aaPredicted RBP7.77□□□□□ -1.17
TRIM48-201ENST00000417545 SNX4O95219 450 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 PGM3O95394 542 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 ZNF682O95780 498 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 CSTAP01040 98 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 SP1P08047 785 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 CCL3P10147 92 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 UBL4AP11441 157 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 HSD17B1P14061 328 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 TBXA2RP21731 343 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 HTR1EP28566 365 aa7.77□□□□□ -1.17
TRIM48-201ENST00000417545 CPOXP36551 454 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms