RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ANGPTL1O95841 491 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 IFI6P09912 130 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 FPR1P21462 350 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 GABRA3P34903 492 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 PSMD4P55036 377 aaKnown RBP13.31□□□□□ -0.28
RPS28-201ENST00000417088 RPS3AP61247 264 aaKnown RBP13.31□□□□□ -0.28
RPS28-201ENST00000417088 PRR5P85299 388 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 C17orf67Q0P5P2 114 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 GRAMD1BQ3KR37 738 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 ANKRD34AQ69YU3 496 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 NOXRED1Q6NXP6 359 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 PRSS57Q6UWY2 283 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 ZYG11AQ6WRX3 759 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 IKBIPQ70UQ0 350 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 FAM214BQ7L5A3 538 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 ZNF551Q7Z340 670 aaPredicted RBP13.31□□□□□ -0.28
RPS28-201ENST00000417088 GGNQ86UU5 652 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 PPP1R14CQ8TAE6 165 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 GFM2Q969S9 779 aaKnown RBP13.31□□□□□ -0.28
RPS28-201ENST00000417088 CCDC126Q96EE4 140 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 EGLN2Q96KS0 407 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 Q96MF0 132 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 CCL19Q99731 98 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 TBL1XR1Q9BZK7 514 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 C3orf14Q9HBI5 128 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 TNFRSF12AQ9NP84 129 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 DCDC2Q9UHG0 476 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 CCL27Q9Y4X3 112 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 TTC36A6NLP5 189 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 RSL1D1O76021 490 aaKnown RBP13.3□□□□□ -0.28
RPS28-201ENST00000417088 MYL2P10916 166 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 FCGR2AP12318 317 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 TBXA2RP21731 343 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 MAP3K8P41279 467 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 SLC6A8P48029 635 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 SLC29A2Q14542 456 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 KIAA0040Q15053 153 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 SGCBQ16585 318 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 FRMD7Q6ZUT3 714 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 YTHDF3Q7Z739 585 aaKnown RBP13.3□□□□□ -0.28
RPS28-201ENST00000417088 PIK3R3Q92569 461 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 CAVIN3Q969G5 261 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 PERPQ96FX8 193 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 KLHL4Q9C0H6 718 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 EQTNQ9NQ60 294 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 RRAGDQ9NQL2 400 aaPredicted RBP13.3□□□□□ -0.28
RPS28-201ENST00000417088 PLSCR4Q9NRQ2 329 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 PSMC3IPQ9P2W1 217 aaPredicted RBP13.3□□□□□ -0.28
RPS28-201ENST00000417088 TBK1Q9UHD2 729 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 VDAC3Q9Y277 283 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 DSCAMO60469 2012 aa13.3□□□□□ -0.28
RPS28-201ENST00000417088 A0A1W2PPM1 405 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 H3BQF6 201 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 EIF1AYO14602 144 aaKnown RBP13.29□□□□□ -0.28
RPS28-201ENST00000417088 NKX2-2O95096 273 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 KCNH1O95259 989 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 PROCP04070 461 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 THBDP07204 575 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 FAM153BP0C7A2 387 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 PRPS2P11908 318 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 HSPB3Q12988 150 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.29□□□□□ -0.28
RPS28-201ENST00000417088 EXOC3L2Q2M3D2 409 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 FAM153CQ494X1 144 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 ANKRD26P1Q6NSI1 321 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 C20orf204Q6ZNR8 217 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 EXOC3L1Q86VI1 746 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 OR4C3Q8NH37 302 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 GPR151Q8TDV0 419 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 HOXB13Q92826 284 aaPredicted RBP13.29□□□□□ -0.28
RPS28-201ENST00000417088 NPAS1Q99742 590 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 TXLNGYQ9BZA5 131 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 CLEC4AQ9UMR7 237 aa13.29□□□□□ -0.28
RPS28-201ENST00000417088 HIVEP2P31629 2446 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 ALG1L2C9J202 215 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 PDPK1O15530 556 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 KLF4O43474 513 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 SS18L1O75177 396 aaPredicted RBP13.28□□□□□ -0.28
RPS28-201ENST00000417088 GLRA3O75311 464 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 SEC22BO75396 215 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 CRCPO75575 148 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 IL11P20809 199 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 EIF1AXP47813 144 aaKnown RBP13.28□□□□□ -0.28
RPS28-201ENST00000417088 DNAJB13P59910 316 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 NAA20P61599 178 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 CTU2Q2VPK5 515 aaKnown RBP13.28□□□□□ -0.28
RPS28-201ENST00000417088 PPP4R4Q6NUP7 873 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 SH2D5Q6ZV89 423 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 OR6K3Q8NGY3 331 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 OR10D3Q8NH80 312 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 SLC9A6Q92581 669 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 CIDECQ96AQ7 238 aaPredicted RBP13.28□□□□□ -0.28
RPS28-201ENST00000417088 METTL2AQ96IZ6 378 aaKnown RBP13.28□□□□□ -0.28
RPS28-201ENST00000417088 ADGRG7Q96K78 797 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 BDH2Q9BUT1 245 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 PRRG4Q9BZD6 226 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 STOML1Q9UBI4 398 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 EMC9Q9Y3B6 208 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 PTGDR2Q9Y5Y4 395 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 RAI1Q7Z5J4 1906 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms