RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 H2AFY2Q9P0M6 372 aaPredicted RBP13.74□□□□□ -0.21
LINC00475-202ENST00000416438 SYNDIG1LA6NDD5 238 aa13.74□□□□□ -0.21
LINC00475-202ENST00000416438 HLA-DPB1P04440 258 aa13.74□□□□□ -0.21
LINC00475-202ENST00000416438 PRG2P13727 222 aa13.74□□□□□ -0.21
LINC00475-202ENST00000416438 FPR3P25089 353 aa13.74□□□□□ -0.21
LINC00475-202ENST00000416438 STAT5AP42229 794 aa13.74□□□□□ -0.21
LINC00475-202ENST00000416438 CCDC85BQ15834 202 aaPredicted RBP13.74□□□□□ -0.21
LINC00475-202ENST00000416438 PUS10Q3MIT2 529 aaKnown RBP13.74□□□□□ -0.21
LINC00475-202ENST00000416438 C2orf27AQ580R0 203 aa13.74□□□□□ -0.21
LINC00475-202ENST00000416438 IL20RBQ6UXL0 311 aa13.74□□□□□ -0.21
LINC00475-202ENST00000416438 FRRS1Q6ZNA5 592 aa13.74□□□□□ -0.21
LINC00475-202ENST00000416438 YIPF7Q8N8F6 280 aa13.74□□□□□ -0.21
LINC00475-202ENST00000416438 RFKQ969G6 155 aa13.74□□□□□ -0.21
LINC00475-202ENST00000416438 KIAA1143Q96AT1 154 aaPredicted RBP13.74□□□□□ -0.21
LINC00475-202ENST00000416438 ACTRT3Q9BYD9 372 aa13.74□□□□□ -0.21
LINC00475-202ENST00000416438 TMEM74BQ9NUR3 256 aa13.74□□□□□ -0.21
LINC00475-202ENST00000416438 KLHL28Q9NXS3 571 aa13.74□□□□□ -0.21
LINC00475-202ENST00000416438 TNFRSF10DQ9UBN6 386 aa13.74□□□□□ -0.21
LINC00475-202ENST00000416438 ALG5Q9Y673 324 aa13.74□□□□□ -0.21
LINC00475-202ENST00000416438 FAM25AB3EWG3 89 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 FAM25CB3EWG5 89 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 FAM25GB3EWG6 89 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 AKAP8O43823 692 aaKnown RBP13.73□□□□□ -0.21
LINC00475-202ENST00000416438 ZGLP1P0C6A0 271 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 GKN3PP0CG01 181 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 TRAPPC2P0DI81 140 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 TRAPPC2BP0DI82 140 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 GCGRP47871 477 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 ERVK-21P61565 698 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 ID2Q02363 134 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 GPR68Q15743 365 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 DECR1Q16698 335 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 TJAP1Q5JTD0 557 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 TMEM240Q5SV17 173 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 ZNF322Q6U7Q0 402 aaPredicted RBP13.73□□□□□ -0.21
LINC00475-202ENST00000416438 VITQ6UXI7 678 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 RTL10Q7L3V2 364 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 SMAP2Q8WU79 429 aaPredicted RBP13.73□□□□□ -0.21
LINC00475-202ENST00000416438 UPRTQ96BW1 309 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 HCAR1Q9BXC0 346 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 DPH1Q9BZG8 443 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 PHPT1Q9NRX4 125 aaPredicted RBP13.73□□□□□ -0.21
LINC00475-202ENST00000416438 STON1Q9Y6Q2 735 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 NPIPA5A0A0B4J1W7 369 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.73□□□□□ -0.21
LINC00475-202ENST00000416438 FAM240BA0A1B0GVZ2 78 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 NPIPA7E9PJI5 369 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 SMLR1H3BR10 107 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 BTN3A3O00478 584 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 KLF4O43474 513 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 KAT7O95251 611 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 YES1P07947 543 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 NPIPA8P0DM63 369 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 ALAS2P22557 587 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 HTR1FP30939 366 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 IFNA8P32881 189 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 SIM1P81133 766 aaPredicted RBP13.73□□□□□ -0.21
LINC00475-202ENST00000416438 PDGFRLQ15198 375 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 RPE65Q16518 533 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 TANGO2Q6ICL3 276 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 MBOAT2Q6ZWT7 520 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 GET4Q7L5D6 327 aaPredicted RBP13.73□□□□□ -0.21
LINC00475-202ENST00000416438 ZNF513Q8N8E2 541 aaPredicted RBP13.73□□□□□ -0.21
LINC00475-202ENST00000416438 DNAJA4Q8WW22 397 aaPredicted RBP13.73□□□□□ -0.21
LINC00475-202ENST00000416438 SMARCD2Q92925 531 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 MOAP1Q96BY2 351 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 GFM1Q96RP9 751 aaKnown RBP13.73□□□□□ -0.21
LINC00475-202ENST00000416438 WACQ9BTA9 647 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 SLC6A17Q9H1V8 727 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 PPIL3Q9H2H8 161 aaKnown RBP13.73□□□□□ -0.21
LINC00475-202ENST00000416438 UBQLN3Q9H347 655 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 TRIM45Q9H8W5 580 aaPredicted RBP13.73□□□□□ -0.21
LINC00475-202ENST00000416438 ATP13A2Q9NQ11 1180 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 RBFOX1Q9NWB1 397 aaKnown RBP13.73□□□□□ -0.21
LINC00475-202ENST00000416438 PTGFRNQ9P2B2 879 aa13.73□□□□□ -0.21
LINC00475-202ENST00000416438 ZNF443Q9Y2A4 671 aaPredicted RBP13.73□□□□□ -0.21
LINC00475-202ENST00000416438 EXOGQ9Y2C4 368 aaKnown RBP13.73□□□□□ -0.21
LINC00475-202ENST00000416438 C12orf71A8MTZ7 269 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 LYRM1O43325 122 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 SCO2O43819 266 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 EML2O95834 649 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 ZNF888P0CJ79 500 aaPredicted RBP13.72□□□□□ -0.21
LINC00475-202ENST00000416438 NDUFV2P19404 249 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 TBXA2RP21731 343 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 PRKAR1BP31321 381 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 GJA4P35212 333 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 CSTF1Q05048 431 aaKnown RBP13.72□□□□□ -0.21
LINC00475-202ENST00000416438 IDNKQ5T6J7 187 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 FAM27D1Q5T7N8 215 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 PRAMEF8Q5VWM4 474 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 PRAMEF7Q5VXH5 474 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 SYCE2Q6PIF2 218 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 WDR88Q6ZMY6 472 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 ZNF836Q6ZNA1 936 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 CXXC5Q7LFL8 322 aaKnown RBP13.72□□□□□ -0.21
LINC00475-202ENST00000416438 OR2T33Q8NG76 320 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 PFN4Q8NHR9 129 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 ZCCHC10Q8TBK6 192 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 GANCQ8TET4 914 aa13.72□□□□□ -0.21
LINC00475-202ENST00000416438 WDR45Q9Y484 360 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms