RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 KRT34O76011 436 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 IGHA1P01876 353 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 LGALS2P05162 132 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 DCNP07585 359 aaKnown RBP2.29□□□□□ -2.04
MCF2-204ENST00000414978 PRKACBP22694 351 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 CMA1P23946 247 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 STARP49675 285 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 GAS1P54826 345 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 CCDC173Q0VFZ6 552 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 NR1D2Q14995 579 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 CCDC6Q16204 474 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 TTC19Q6DKK2 380 aaPredicted RBP2.29□□□□□ -2.04
MCF2-204ENST00000414978 BLIDQ8IZY5 108 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 BPIFCQ8NFQ6 507 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 OR7A2PQ8NGA2 310 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 OR52J3Q8NH60 311 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 NANPQ8TBE9 248 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 LRRC15Q8TF66 581 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 PHF21BQ96EK2 531 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 UHRF2Q96PU4 802 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 ERGIC2Q96RQ1 377 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 SSX3Q99909 188 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 TSSK1BQ9BXA7 367 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 SPZ1Q9BXG8 430 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 NUSAP1Q9BXS6 441 aaKnown RBP2.29□□□□□ -2.04
MCF2-204ENST00000414978 MIS12Q9H081 205 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 C5orf66Q9H5L9 145 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 MSL2Q9HCI7 577 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 GDF3Q9NR23 364 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.29□□□□□ -2.04
MCF2-204ENST00000414978 RAB20Q9NX57 234 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 KLHL8Q9P2G9 620 aaPredicted RBP2.29□□□□□ -2.04
MCF2-204ENST00000414978 SLC17A6Q9P2U8 582 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 IKZF3Q9UKT9 509 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 IFT52Q9Y366 437 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 BAZ2BQ9UIF8 2168 aaKnown RBP2.29□□□□□ -2.04
MCF2-204ENST00000414978 ACACBO00763 2458 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 GPR179Q6PRD1 2367 aa2.29□□□□□ -2.04
MCF2-204ENST00000414978 ZNF462Q96JM2 2506 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 FAM74A7A6NL05 159 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 HIDE1A8MVS5 230 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 TMCO5BA8MYB1 307 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.28□□□□□ -2.04
MCF2-204ENST00000414978 ZNF814B7Z6K7 855 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 B8ZZF3 427 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 WWP2O00308 870 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 HDAC3O15379 428 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 CIDEAO60543 219 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 TBX19O60806 448 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 KRT6AP02538 564 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 GSTA2P09210 222 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 EPCAMP16422 314 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 GPX3P22352 226 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 PPP2R1BP30154 601 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 NMT1P30419 496 aaKnown RBP2.28□□□□□ -2.04
MCF2-204ENST00000414978 MAGEA8P43361 318 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 SYKP43405 635 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 IER3P46695 156 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 TPMTP51580 245 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 NDUFA8P51970 172 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 NAPAP54920 295 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 FAM74A3Q4VXF1 159 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 PLPP4Q5VZY2 271 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 TTC23Q5W5X9 447 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 PAPD7Q5XG87 772 aaKnown RBP2.28□□□□□ -2.04
MCF2-204ENST00000414978 NCAPH2Q6IBW4 605 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 TMEM219Q86XT9 240 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 CHERPQ8IWX8 916 aaKnown RBP2.28□□□□□ -2.04
MCF2-204ENST00000414978 STXBP6Q8NFX7 210 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 OR4F17Q8NGA8 305 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 OR13C3Q8NGS6 347 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 OR4F5Q8NH21 305 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 TADA1Q96BN2 335 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 C7orf34Q96L11 122 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 IFT74Q96LB3 600 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 OR4F4Q96R69 305 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 ZBTB18Q99592 522 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 PARD6GQ9BYG4 376 aaPredicted RBP2.28□□□□□ -2.04
MCF2-204ENST00000414978 FRMD8P1Q9BZ68 369 aaPredicted RBP2.28□□□□□ -2.04
MCF2-204ENST00000414978 VN1R1Q9GZP7 353 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 ELOVL3Q9HB03 270 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 BEX1Q9HBH7 125 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 APOBEC3GQ9HC16 384 aaKnown RBP2.28□□□□□ -2.04
MCF2-204ENST00000414978 C6orf50Q9HD87 102 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 EXOC1Q9NV70 894 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 P2RX2Q9UBL9 471 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 ZNHIT2Q9UHR6 403 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 TIMM22Q9Y584 194 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 DMRT1Q9Y5R6 373 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 GMEB1Q9Y692 573 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 A0A0J9YVX5 310 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 ILVBLA1L0T0 632 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 FAM149AA5PLN7 773 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 OR6C74A6NCV1 312 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 OR6C75A6NL08 312 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 TMEM150CB9EJG8 249 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 BTN3A3O00478 584 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 CDX4O14627 284 aaPredicted RBP2.28□□□□□ -2.04
MCF2-204ENST00000414978 PRRG1O14668 218 aa2.28□□□□□ -2.04
MCF2-204ENST00000414978 CYTH3O43739 400 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms