RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 CRYMQ14894 314 aa13.93□□□□□ -0.18
CPNE1-208ENST00000414711 SPANXN3Q5MJ09 141 aa13.93□□□□□ -0.18
CPNE1-208ENST00000414711 HP1BP3Q5SSJ5 553 aaPredicted RBP13.93□□□□□ -0.18
CPNE1-208ENST00000414711 SLC22A25Q6T423 547 aa13.93□□□□□ -0.18
CPNE1-208ENST00000414711 B3GLCTQ6Y288 498 aa13.93□□□□□ -0.18
CPNE1-208ENST00000414711 Q6ZSR9 355 aa13.93□□□□□ -0.18
CPNE1-208ENST00000414711 GALNT10Q86SR1 603 aa13.93□□□□□ -0.18
CPNE1-208ENST00000414711 CNTN4Q8IWV2 1026 aa13.93□□□□□ -0.18
CPNE1-208ENST00000414711 GSPT2Q8IYD1 628 aaKnown RBP13.93□□□□□ -0.18
CPNE1-208ENST00000414711 TCAIMQ8N3R3 496 aa13.93□□□□□ -0.18
CPNE1-208ENST00000414711 LINC01356Q8N9X3 169 aa13.93□□□□□ -0.18
CPNE1-208ENST00000414711 OR7G3Q8NG95 312 aa13.93□□□□□ -0.18
CPNE1-208ENST00000414711 ESAMQ96AP7 390 aa13.93□□□□□ -0.18
CPNE1-208ENST00000414711 BPESC1Q9GZL8 116 aa13.93□□□□□ -0.18
CPNE1-208ENST00000414711 PAQR5Q9NXK6 330 aaPredicted RBP13.93□□□□□ -0.18
CPNE1-208ENST00000414711 MED11Q9P086 117 aa13.93□□□□□ -0.18
CPNE1-208ENST00000414711 CTNNAL1Q9UBT7 734 aa13.93□□□□□ -0.18
CPNE1-208ENST00000414711 KMT2CQ8NEZ4 4911 aaKnown RBP13.92□□□□□ -0.18
CPNE1-208ENST00000414711 LOC390937A0A1W2PQ73 354 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 TSPAN2O60636 221 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 ALX3O95076 343 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 FAM153BP0C7A2 387 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 COL6A2P12110 1019 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 GGT5P36269 586 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 LIMS1P48059 325 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 XKP51811 444 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 CHRNB3Q05901 458 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 STX5Q13190 355 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 FASTKD3Q14CZ7 662 aaKnown RBP13.92□□□□□ -0.18
CPNE1-208ENST00000414711 TGFBIQ15582 683 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 FAM153CQ494X1 144 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 ZNF544Q6NX49 715 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 FAM111BQ6SJ93 734 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 TRMT10CQ7L0Y3 403 aaKnown RBP13.92□□□□□ -0.18
CPNE1-208ENST00000414711 GALNT7Q86SF2 657 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 IGDCC3Q8IVU1 814 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 NKAPQ8N5F7 415 aaKnown RBP13.92□□□□□ -0.18
CPNE1-208ENST00000414711 OR4K14Q8NGD5 310 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 OR52R1Q8NGF1 315 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 AENQ8WTP8 325 aaKnown RBP13.92□□□□□ -0.18
CPNE1-208ENST00000414711 MUCL1Q96DR8 90 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 C1GALT1C1Q96EU7 318 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 CFAP36Q96G28 342 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 PTGES2Q9H7Z7 377 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 CORO1CQ9ULV4 474 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-208ENST00000414711 PCDHB10Q9UN67 800 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 PMF1-BGLAPU3KQ54 211 aa13.92□□□□□ -0.18
CPNE1-208ENST00000414711 CCDC151A5D8V7 595 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 CXCL13O43927 109 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 STK16O75716 305 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 CBX7O95931 251 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 PCMT1P22061 227 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 EVI2BP34910 448 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 PHBP35232 272 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 KRT20P35900 424 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 ARFIP1P53367 373 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 MGAT2Q10469 447 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 E2F2Q14209 437 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 ZNF460Q14592 562 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 PRICKLE4Q2TBC4 344 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 LGSNQ5TDP6 509 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 STEAP4Q687X5 459 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 TMEM108Q6UXF1 575 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 LARP4Q71RC2 724 aaKnown RBP eCLIP13.91□□□□□ -0.18
CPNE1-208ENST00000414711 TDRPQ86YL5 185 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 OR2W6PQ8NHA6 318 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 HUS1BQ8NHY5 278 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 MRPL24Q96A35 216 aaKnown RBP13.91□□□□□ -0.18
CPNE1-208ENST00000414711 ADGRG7Q96K78 797 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 TRMOQ9BU70 441 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 CDC42EP4Q9H3Q1 356 aaKnown RBP13.91□□□□□ -0.18
CPNE1-208ENST00000414711 DDX31Q9H8H2 851 aaKnown RBP13.91□□□□□ -0.18
CPNE1-208ENST00000414711 MYOZ1Q9NP98 299 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-208ENST00000414711 ARGLU1Q9NWB6 273 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-208ENST00000414711 MAT2BQ9NZL9 334 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 STOML1Q9UBI4 398 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 PRODH2Q9UF12 536 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 MGAT4BQ9UQ53 548 aa13.91□□□□□ -0.18
CPNE1-208ENST00000414711 GPR55Q9Y2T6 319 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-208ENST00000414711 SHISA8B8ZZ34 492 aa13.9□□□□□ -0.18
CPNE1-208ENST00000414711 LYZL6O75951 148 aa13.9□□□□□ -0.18
CPNE1-208ENST00000414711 DHRS4L1P0CG22 281 aa13.9□□□□□ -0.18
CPNE1-208ENST00000414711 PORP16435 677 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-208ENST00000414711 APEX1P27695 318 aaKnown RBP13.9□□□□□ -0.18
CPNE1-208ENST00000414711 IL2RGP31785 369 aa13.9□□□□□ -0.18
CPNE1-208ENST00000414711 BSGP35613 385 aa13.9□□□□□ -0.18
CPNE1-208ENST00000414711 EMDP50402 254 aa13.9□□□□□ -0.18
CPNE1-208ENST00000414711 MAP4K2Q12851 820 aa13.9□□□□□ -0.18
CPNE1-208ENST00000414711 FRG1Q14331 258 aaKnown RBP13.9□□□□□ -0.18
CPNE1-208ENST00000414711 GLYR1Q49A26 553 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-208ENST00000414711 TMEM201Q5SNT2 666 aa13.9□□□□□ -0.18
CPNE1-208ENST00000414711 USP43Q70EL4 1123 aa13.9□□□□□ -0.18
CPNE1-208ENST00000414711 SSX8Q7RTT4 187 aa13.9□□□□□ -0.18
CPNE1-208ENST00000414711 NUFIP2Q7Z417 695 aaKnown RBP13.9□□□□□ -0.18
CPNE1-208ENST00000414711 ZNF540Q8NDQ6 660 aa13.9□□□□□ -0.18
CPNE1-208ENST00000414711 SORCS2Q96PQ0 1159 aa13.9□□□□□ -0.18
CPNE1-208ENST00000414711 TXLNGYQ9BZA5 131 aa13.9□□□□□ -0.18
CPNE1-208ENST00000414711 NINJ2Q9NZG7 142 aa13.9□□□□□ -0.18
CPNE1-208ENST00000414711 ZNF639Q9UID6 485 aa13.9□□□□□ -0.18
CPNE1-208ENST00000414711 CCNT2O60583 730 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms