RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SFTPDP35247 375 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 MECP2P51608 486 aaKnown RBP16.26■□□□□ 0.19
PHRF1-202ENST00000413872 PSPHP78330 225 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 ECH1Q13011 328 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 TMEM69Q5SWH9 247 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 PARM1Q6UWI2 310 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 ZNF517Q6ZMY9 492 aaPredicted RBP16.26■□□□□ 0.19
PHRF1-202ENST00000413872 ACOT11Q8WXI4 607 aaPredicted RBP16.26■□□□□ 0.19
PHRF1-202ENST00000413872 CREB3L1Q96BA8 519 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 DENRO43583 198 aaKnown RBP16.26■□□□□ 0.19
PHRF1-202ENST00000413872 GKN3PP0CG01 181 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 TNFRSF17Q02223 184 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 TRIM61Q5EBN2 209 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 MANEAQ5SRI9 462 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 WBP2NLQ6ICG8 309 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 SNIP1Q8TAD8 396 aaKnown RBP16.26■□□□□ 0.19
PHRF1-202ENST00000413872 ZFPM2Q8WW38 1151 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 FAM46BQ96A09 425 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 ATG5Q9H1Y0 275 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 OR10A4Q9H209 315 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 FARSAQ9Y285 508 aaKnown RBP16.26■□□□□ 0.19
PHRF1-202ENST00000413872 MYH15Q9Y2K3 1946 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 LSM1O15116 133 aaKnown RBP16.26■□□□□ 0.19
PHRF1-202ENST00000413872 PIN1Q13526 163 aaPredicted RBP16.26■□□□□ 0.19
PHRF1-202ENST00000413872 MLC1Q15049 377 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 CDK10Q15131 360 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 ZNF704Q6ZNC4 412 aaPredicted RBP16.26■□□□□ 0.19
PHRF1-202ENST00000413872 ADAMTS16Q8TE57 1224 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 DNAJA3Q96EY1 480 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 RBM24Q9BX46 236 aaKnown RBP16.26■□□□□ 0.19
PHRF1-202ENST00000413872 ULBP3Q9BZM4 244 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 NUFIP1Q9UHK0 495 aaKnown RBP16.26■□□□□ 0.19
PHRF1-202ENST00000413872 SLC1A7O00341 560 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 GJB3O75712 270 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 APOL3O95236 402 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 PPP1R3DO95685 299 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 STOMP27105 288 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 DCTP40126 519 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 TSFMP43897 325 aaKnown RBP16.25■□□□□ 0.19
PHRF1-202ENST00000413872 MAZP56270 477 aaKnown RBP16.25■□□□□ 0.19
PHRF1-202ENST00000413872 TAP2Q03519 686 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 GLO1Q04760 184 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 PRSS48Q7RTY5 328 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 PRR22Q8IZ63 422 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 L3MBTL4Q8NA19 623 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 OR8S1Q8NH09 359 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 ADOQ96SZ5 270 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 PMF1-BGLAPU3KQ54 211 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 SLC35F4A4IF30 521 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 MAGEA3P43357 314 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 DCDP81605 110 aaKnown RBP16.25■□□□□ 0.19
PHRF1-202ENST00000413872 REEP5Q00765 189 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 FAM180BQ6P0A1 224 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 OR51Q1Q8NH59 317 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 RADILQ96JH8 1075 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 DPH1Q9BZG8 443 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 SEMA6CQ9H3T2 930 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 NUDT15Q9NV35 164 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 MYF6P23409 242 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 SPERTQ8NA61 448 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 ANKK1Q8NFD2 765 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 CHFRQ96EP1 664 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 ARL5BQ96KC2 179 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 MMACHCQ9Y4U1 282 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 H3BML4 177 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 POU3F2P20265 443 aaPredicted RBP16.25■□□□□ 0.19
PHRF1-202ENST00000413872 IDUAP35475 653 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 TPTEP56180 551 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 AFMIDQ63HM1 303 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 MISPQ8IVT2 679 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 KHSRPQ92945 711 aaKnown RBP eCLIP16.25■□□□□ 0.191e-7■□□□□ 11.1
PHRF1-202ENST00000413872 OR7D2Q96RA2 312 aa16.25■□□□□ 0.19
PHRF1-202ENST00000413872 A0A1W2PPW3 197 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 GDF1P27539 372 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 EPHA4P54764 986 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 PROX2Q3B8N5 592 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 TMEM53Q6P2H8 277 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 DCDC5Q6ZRR9 648 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 GAREM1Q9H706 876 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 ZNF696Q9H7X3 374 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 VDAC3Q9Y277 283 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 SLCO2B1O94956 709 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 MAB21L1Q13394 359 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 KEAP1Q14145 624 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 C5orf46Q6UWT4 87 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 SLCO4C1Q6ZQN7 724 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 GATAD2BQ8WXI9 593 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 CCDC115Q96NT0 180 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 SMOXQ9NWM0 555 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 TESQ9UGI8 421 aaKnown RBP16.24■□□□□ 0.19
PHRF1-202ENST00000413872 PRRC2BQ5JSZ5 2229 aaKnown RBP16.24■□□□□ 0.19
PHRF1-202ENST00000413872 hCG_1807616A0A1W2PRN6 198 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 CLCA1A8K7I4 914 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 AP1G1O43747 822 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 ZDHHC11BP0C7U3 371 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 PET100P0DJ07 73 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 CFL1P23528 166 aaKnown RBP16.24■□□□□ 0.19
PHRF1-202ENST00000413872 GALNT6Q8NCL4 622 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 ISOC1Q96CN7 298 aa16.24■□□□□ 0.19
PHRF1-202ENST00000413872 MACROD1Q9BQ69 325 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms