RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ZNF75CPQ92670 426 aaPredicted RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 SDCCAG3Q96C92 435 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 FAM120BQ96EK7 910 aaKnown RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 GIMAP5Q96F15 307 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 TREX2Q9BQ50 279 aaPredicted RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 NMUR2Q9GZQ4 415 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 TSPAN10Q9H1Z9 355 aaPredicted RBP5.82□□□□□ -1.48
USP54-202ENST00000413442 PIGMQ9H3S5 423 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 RABEP2Q9H5N1 569 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 RMND5AQ9H871 391 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 GLRX2Q9NS18 164 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 PNPLA3Q9NST1 481 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 TAS2R10Q9NYW0 307 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 ZIM2Q9NZV7 527 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 DOPEY2Q9Y3R5 2298 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 ZNF407Q9C0G0 2248 aa5.82□□□□□ -1.48
USP54-202ENST00000413442 NUP214P35658 2090 aaPredicted RBP5.81□□□□□ -1.48
USP54-202ENST00000413442 HCFC1P51610 2035 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 GOLGA8QA0A0J9YX86 632 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 GOLGA8OA6NCC3 632 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 TMEM233B4DJY2 109 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 E9PBE3 544 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 GOLGA8NF8WBI6 632 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 GNB5O14775 395 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 ANKRD28O15084 1053 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 ZIC3O60481 467 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 SCN2BO60939 215 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 SLC22A3O75751 556 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 LRATO95237 230 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 UTS2O95399 124 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 ZIC2O95409 532 aaPredicted RBP5.81□□□□□ -1.48
USP54-202ENST00000413442 GLI4P10075 376 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 FCGR2AP12318 317 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 H2AFXP16104 143 aaPredicted RBP5.81□□□□□ -1.48
USP54-202ENST00000413442 ZNF708P17019 499 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 IL11P20809 199 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 MATN1P21941 496 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 CTSSP25774 331 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 ARRB2P32121 409 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 DCTP40126 519 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 RFC3P40938 356 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 TRPC1P48995 793 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 CLK1P49759 484 aaKnown RBP5.81□□□□□ -1.48
USP54-202ENST00000413442 P2RX1P51575 399 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 ATP12AP54707 1039 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 RAC1P63000 192 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 HBA1P69905 142 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 PTGR1Q14914 329 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 PDCD2Q16342 344 aaPredicted RBP5.81□□□□□ -1.48
USP54-202ENST00000413442 PGS1Q32NB8 556 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 ARHGAP11BQ3KRB8 267 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 PDCD4Q53EL6 469 aaKnown RBP5.81□□□□□ -1.48
USP54-202ENST00000413442 KLHL26Q53HC5 615 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 ZNF385BQ569K4 471 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 C1QTNF12Q5T7M4 302 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 CES4AQ5XG92 561 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 FAM180BQ6P0A1 224 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 NPSR1Q6W5P4 371 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 C6orf120Q7Z4R8 191 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 ADGRE4PQ86SQ3 457 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 CMIPQ8IY22 773 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 PRR22Q8IZ63 422 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 ANKRD42Q8N9B4 389 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 OR2M3Q8NG83 312 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 AGR3Q8TD06 166 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 DYDC1Q8WWB3 177 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 GFM2Q969S9 779 aaKnown RBP5.81□□□□□ -1.48
USP54-202ENST00000413442 CIDECQ96AQ7 238 aaPredicted RBP5.81□□□□□ -1.48
USP54-202ENST00000413442 ARSGQ96EG1 525 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 WDYHV1Q96HA8 205 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 CCDC115Q96NT0 180 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 SDF2Q99470 211 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 SH3GL2Q99962 352 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 USB1Q9BQ65 265 aaKnown RBP5.81□□□□□ -1.48
USP54-202ENST00000413442 CCDC28BQ9BUN5 200 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 UGT2B28Q9BY64 529 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 NUF2Q9BZD4 464 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 C20orf27Q9GZN8 174 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 SAP130Q9H0E3 1048 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 RAD21L1Q9H4I0 556 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 ARMC7Q9H6L4 198 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 EVA1AQ9H8M9 152 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 GP6Q9HCN6 339 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 TIGARQ9NQ88 270 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 SDR39U1Q9NRG7 319 aaPredicted RBP5.81□□□□□ -1.48
USP54-202ENST00000413442 SIRT3Q9NTG7 399 aaPredicted RBP5.81□□□□□ -1.48
USP54-202ENST00000413442 AIG1Q9NVV5 245 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 CALML5Q9NZT1 146 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 KCNN3Q9UGI6 736 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 DKKL1Q9UK85 242 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 RNF6Q9Y252 685 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 ZNF175Q9Y473 711 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 DTNAQ9Y4J8 743 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 HRH3Q9Y5N1 445 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 SNX8Q9Y5X2 465 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 GPR45Q9Y5Y3 372 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 GPC6Q9Y625 555 aaPredicted RBP5.81□□□□□ -1.48
USP54-202ENST00000413442 GMEB1Q9Y692 573 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 NCKAP5O14513 1909 aa5.81□□□□□ -1.48
USP54-202ENST00000413442 ICE1Q9Y2F5 2266 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms