RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 SEC22CQ9BRL7 303 aa13.08□□□□□ -0.31
CLTCL1-201ENST00000412649 DMRT3Q9NQL9 472 aa13.08□□□□□ -0.31
CLTCL1-201ENST00000412649 TAC3Q9UHF0 121 aa13.08□□□□□ -0.31
CLTCL1-201ENST00000412649 MED31Q9Y3C7 131 aa13.08□□□□□ -0.31
CLTCL1-201ENST00000412649 DOCK5Q9H7D0 1870 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 OAZ2O95190 189 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 SOD1P00441 154 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 TACSTD2P09758 323 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF30P17039 623 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 SREBF2Q12772 1141 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 KIAA1211LQ6NV74 962 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 PRSS55Q6UWB4 352 aaPredicted RBP13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 Q6ZVL8 140 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 PLA2G15Q8NCC3 412 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 DPF3Q92784 378 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 NKX6-2Q9C056 277 aaPredicted RBP13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 OR2AG1Q9H205 316 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 C5AR2Q9P296 337 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 POMT2Q9UKY4 750 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 OR10H1Q9Y4A9 318 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 ACOT7O00154 380 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 CASC3O15234 703 aaKnown RBP13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 SSX5O60225 188 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 FARS2O95363 451 aaKnown RBP13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 NPR2P20594 1047 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 MMP11P24347 488 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 PGGHGQ32M88 737 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 ACSM5Q6NUN0 579 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 TMEM65Q6PI78 240 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 CRTC1Q6UUV9 634 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF627Q7L945 461 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 PEG10Q86TG7 708 aaKnown RBP13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 PCSK9Q8NBP7 692 aaKnown RBP13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 RTP3Q9BQQ7 232 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 R3HDMLQ9H3Y0 253 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 TAS2R8Q9NYW2 309 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 PHIPQ8WWQ0 1821 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 TRAPPC13A5PLN9 417 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 GLOD5A6NK44 160 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 TNFRSF10BO14763 440 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF432O94892 652 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 GIPP09681 153 aaPredicted RBP13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 AHRP35869 848 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 TSPAN31Q12999 210 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 TMUB2Q71RG4 321 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 JAZF1Q86VZ6 243 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 SDR16C5Q8N3Y7 309 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 GPR137Q96N19 417 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 PCBD2Q9H0N5 130 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 FBXL2Q9UKC9 423 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 CAMK2AQ9UQM7 478 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 ERVK-19Q9WJR5 959 aa13.08□□□□□ -0.32
CLTCL1-201ENST00000412649 LCMT2O60294 686 aaKnown RBP13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 B4GALT3O60512 393 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 STC2O76061 302 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 SYPP08247 313 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 VAMP1P23763 118 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 MAPK3P27361 379 aaPredicted RBP13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 FGF9P31371 208 aaPredicted RBP13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 PTH2RP49190 550 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 GZMMP51124 257 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 MRPS10P82664 201 aaKnown RBP13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 MAPK14Q16539 360 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 C18orf63Q68DL7 685 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 NXPE4Q6UWF7 544 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 GDPD4Q6W3E5 623 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 FAM83HQ6ZRV2 1179 aaPredicted RBP13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 SLAIN1Q8ND83 568 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 ARL11Q969Q4 196 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 RNF170Q96K19 258 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 ARHGAP9Q9BRR9 750 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 POTEKPQ9BYX7 375 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 IGHA2P01877 340 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 EIF4EP06730 217 aaKnown RBP13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 FURINP09958 794 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 RPL17P18621 184 aaKnown RBP13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 PGDP52209 483 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 ARHGDIBP52566 201 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 DGCR2P98153 550 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF615Q8N8J6 731 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 LINC00052Q96N35 136 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 F2RL3Q96RI0 385 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 BTBD2Q9BX70 525 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 NPIPB15A6NHN6 443 aaPredicted RBP13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF623O75123 536 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 EOMESO95936 686 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 ACP5P13686 325 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 SOX18P35713 384 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 CBX5P45973 191 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 SOX2P48431 317 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 SEC61A1P61619 476 aaKnown RBP13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 ACTA2P62736 377 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 ACTG2P63267 376 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 SYPL1Q16563 259 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 PCGF3Q3KNV8 242 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 WDR53Q7Z5U6 358 aaPredicted RBP13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 RNF180Q86T96 592 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF280BQ86YH2 543 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 SMAP2Q8WU79 429 aaPredicted RBP13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 HMX1Q9NP08 348 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms