RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 OLIG3Q7RTU3 272 aa11.99□□□□□ -0.49
HDAC8-210ENST00000412342 MARCH3Q86UD3 253 aa11.99□□□□□ -0.49
HDAC8-210ENST00000412342 RNF130Q86XS8 419 aa11.99□□□□□ -0.49
HDAC8-210ENST00000412342 MSRB3Q8IXL7 192 aa11.99□□□□□ -0.49
HDAC8-210ENST00000412342 TRIML2Q8N7C3 387 aa11.99□□□□□ -0.49
HDAC8-210ENST00000412342 FAM57AQ8TBR7 257 aa11.99□□□□□ -0.49
HDAC8-210ENST00000412342 C10orf82Q8WW14 230 aa11.99□□□□□ -0.49
HDAC8-210ENST00000412342 SPDL1Q96EA4 605 aa11.99□□□□□ -0.49
HDAC8-210ENST00000412342 CHMP6Q96FZ7 201 aa11.99□□□□□ -0.49
HDAC8-210ENST00000412342 ITCHQ96J02 903 aa11.99□□□□□ -0.49
HDAC8-210ENST00000412342 G6PC3Q9BUM1 346 aa11.99□□□□□ -0.49
HDAC8-210ENST00000412342 OR2B2Q9GZK3 357 aa11.99□□□□□ -0.49
HDAC8-210ENST00000412342 RMND5AQ9H871 391 aa11.99□□□□□ -0.49
HDAC8-210ENST00000412342 KLHL14Q9P2G3 628 aa11.99□□□□□ -0.49
HDAC8-210ENST00000412342 TINAGQ9UJW2 476 aa11.99□□□□□ -0.49
HDAC8-210ENST00000412342 NCOA6Q14686 2063 aaPredicted RBP11.99□□□□□ -0.49
HDAC8-210ENST00000412342 DOPEY1Q5JWR5 2465 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 TRGV5A0A0B4J1U4 118 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 NPIPA5A0A0B4J1W7 369 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 A0A1W2PQD3 144 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 OR14I1A6ND48 311 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 DUXAA6NLW8 204 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 NPIPA7E9PJI5 369 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 HMGN4O00479 90 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 NR5A2O00482 541 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 LRRTM2O43300 516 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 CBR3O75828 277 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 ANGPTL1O95841 491 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 AK1P00568 194 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 LDLRP01130 860 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 GUSBP08236 651 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 NPIPA8P0DM63 369 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 OR12D1P0DN82 309 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 ABOP16442 354 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 NCF2P19878 526 aaPredicted RBP11.98□□□□□ -0.49
HDAC8-210ENST00000412342 CHI3L1P36222 383 aaPredicted RBP11.98□□□□□ -0.49
HDAC8-210ENST00000412342 KHKP50053 298 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 ARFIP2P53365 341 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 SF3A3Q12874 501 aaKnown RBP eCLIP11.98□□□□□ -0.49
HDAC8-210ENST00000412342 UBAP2LQ14157 1087 aaKnown RBP11.98□□□□□ -0.49
HDAC8-210ENST00000412342 MAPK11Q15759 364 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 CD226Q15762 336 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 ARHGAP11BQ3KRB8 267 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 AGKQ53H12 422 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 EIPR1Q53HC9 387 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 COX20Q5RI15 118 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.98□□□□□ -0.49
HDAC8-210ENST00000412342 OR5M10Q6IEU7 315 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 DOLPP1Q86YN1 238 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 FAM83FQ8NEG4 500 aaPredicted RBP11.98□□□□□ -0.49
HDAC8-210ENST00000412342 OR2M3Q8NG83 312 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 NEIL3Q8TAT5 605 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 RAB8BQ92930 207 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 AURKBQ96GD4 344 aaPredicted RBP11.98□□□□□ -0.49
HDAC8-210ENST00000412342 ZNF350Q9GZX5 532 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 UBQLN4Q9NRR5 601 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 SLC25A37Q9NYZ2 338 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 SLAMF8Q9P0V8 285 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 TNFRSF10DQ9UBN6 386 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 KCNE5Q9UJ90 142 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 TRIM33Q9UPN9 1127 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 SLC5A6Q9Y289 635 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 PCDHB14Q9Y5E9 798 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 PCDHGB3Q9Y5G1 929 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 GMEB1Q9Y692 573 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 MED12Q93074 2177 aa11.98□□□□□ -0.49
HDAC8-210ENST00000412342 A0A096LPI6 279 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 TRGV8A0A0C4DH27 118 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 CENPVL1A0A0U1RR11 272 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 A0A1W2PP18 115 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 FCMRO60667 390 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 SRD5A2P31213 254 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 DCTP40126 519 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 CRYZQ08257 329 aaKnown RBP11.97□□□□□ -0.49
HDAC8-210ENST00000412342 STX5Q13190 355 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 KLHL26Q53HC5 615 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 NHSL2Q5HYW2 709 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 WIPI1Q5MNZ9 446 aaPredicted RBP11.97□□□□□ -0.49
HDAC8-210ENST00000412342 C6orf10Q5SRN2 563 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 TYW3Q6IPR3 259 aaKnown RBP11.97□□□□□ -0.49
HDAC8-210ENST00000412342 YRDCQ86U90 279 aaKnown RBP11.97□□□□□ -0.49
HDAC8-210ENST00000412342 CD163Q86VB7 1156 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 FJX1Q86VR8 437 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 PNPT1Q8TCS8 783 aaKnown RBP11.97□□□□□ -0.49
HDAC8-210ENST00000412342 DUSP19Q8WTR2 217 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 KLHDC3Q9BQ90 382 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 TBL1XR1Q9BZK7 514 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 NMUR2Q9GZQ4 415 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 SAP130Q9H0E3 1048 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 DSN1Q9H410 356 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 RABEP2Q9H5N1 569 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 TPT1P8Q9HAU6 139 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 PPP4R1LQ9P1A2 415 aa11.97□□□□□ -0.49
HDAC8-210ENST00000412342 MRPS18CQ9Y3D5 142 aaKnown RBP11.97□□□□□ -0.49
HDAC8-210ENST00000412342 PHF3Q92576 2039 aaKnown RBP11.96□□□□□ -0.49
HDAC8-210ENST00000412342 A0A1B0GUH1 482 aa11.96□□□□□ -0.49
HDAC8-210ENST00000412342 NPIPA2E9PIF3 369 aa11.96□□□□□ -0.49
HDAC8-210ENST00000412342 NPIPA3F8WFD2 350 aa11.96□□□□□ -0.49
HDAC8-210ENST00000412342 KIAA0513O60268 411 aa11.96□□□□□ -0.49
HDAC8-210ENST00000412342 ZIC3O60481 467 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms