RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 LRRC66Q68CR7 880 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 C11orf63Q6NUN7 778 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 LRRC8BQ6P9F7 803 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 CCDC174Q6PII3 467 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 CWC27Q6UX04 472 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 CLEC9AQ6UXN8 241 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 SYNE3Q6ZMZ3 975 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 DGAT2L6Q6ZPD8 337 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 ERN2Q76MJ5 926 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 MRPL21Q7Z2W9 205 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 PIWIL4Q7Z3Z4 852 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 LHFPL4Q7Z7J7 247 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 PRPF39Q86UA1 669 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 MARCH3Q86UD3 253 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZC3HC1Q86WB0 502 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 SFRP1Q8N474 314 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 DPP10Q8N608 796 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 CELF5Q8N6W0 485 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 PAF1Q8N7H5 531 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF781Q8N8C0 355 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF383Q8NA42 475 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 WFDC9Q8NEX5 89 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR56A4Q8NGH8 313 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR13G1Q8NGZ3 307 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 LYPD6BQ8NI32 183 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 CCDC26Q8TAB7 109 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 VN1R17PQ8TDU5 208 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 DUSP19Q8WTR2 217 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 CORO2AQ92828 525 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMEM106AQ96A25 262 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 APH1AQ96BI3 265 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 GPRASP2Q96D09 838 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 C5orf30Q96GV9 206 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 VPS50Q96JG6 964 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 FAM71F1Q96KD3 344 aaPredicted RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 PRMT6Q96LA8 375 aaPredicted RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 GPR101Q96P66 508 aaPredicted RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR2M2Q96R28 347 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 CNN2Q99439 309 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 CLSTN3Q9BQT9 956 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 FRMD8Q9BZ67 464 aaPredicted RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 ROPN1BQ9BZX4 212 aaPredicted RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 CHST5Q9GZS9 411 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 INTS2Q9H0H0 1204 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 DDX47Q9H0S4 455 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 PLEKHA1Q9HB21 404 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 ATP6V0A4Q9HBG4 840 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 NLRC4Q9NPP4 1024 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 FBXO6Q9NRD1 293 aaPredicted RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 C20orf96Q9NUD7 363 aaPredicted RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 DPP3Q9NY33 737 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 C6orf203Q9P0P8 240 aaPredicted RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 BCCIPQ9P287 314 aaKnown RBP eCLIP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 NFKBIL1Q9UBC1 381 aaPredicted RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 HERC5Q9UII4 1024 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 MID2Q9UJV3 735 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 PCDHGB4Q9UN71 923 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 L1RE1Q9UN81 338 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 PA2G4Q9UQ80 394 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 PDE10AQ9Y233 779 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 LZTS1Q9Y250 596 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 RAP2CQ9Y3L5 183 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 KPTNQ9Y664 436 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 CDH10Q9Y6N8 788 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 U3KQ87 197 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 FYCO1Q9BQS8 1478 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 TRPM6Q9BX84 2022 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 TAF1P21675 1872 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 SBNO1A3KN83 1393 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 DNAH12Q6ZR08 3092 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 TRBV5-7A0A0A0MS05 114 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 IGHV3-72A0A0B4J1Y9 119 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 TRGV8A0A0C4DH27 118 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 A0A1B0GUS0 222 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 FAM92AA1XBS5 289 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 FUOMA2VDF0 154 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 PSMB11A5LHX3 300 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 ARRDC5A6NEK1 342 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 ENO4A6NNW6 628 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 PLRG1O43660 514 aaKnown RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 NUDT21O43809 227 aaKnown RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 NOS1APO75052 506 aaPredicted RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 PGLYRP1O75594 196 aaPredicted RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 PDE9AO76083 593 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 TIMP1P01033 207 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 MT-ND2P03891 347 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 HEXBP07686 556 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 FAM106CPP0CH98 169 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 PNMA6AP0CW24 399 aaPredicted RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 PECAM1P16284 738 aaPredicted RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 BGNP21810 368 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 PON1P27169 355 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 HTR1BP28222 390 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 GALR1P47211 349 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 REG1BP48304 166 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 CSNK1A1P48729 337 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 IDH2P48735 452 aaKnown RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 CX3CR1P49238 355 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 ARRB1P49407 418 aaPredicted RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 XKP51811 444 aa-1.97□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms