RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ABHD6Q9BV23 337 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 RIOK2Q9BVS4 552 aaKnown RBP4.27□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF416Q9BWM5 594 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 HDHD5Q9BXW7 423 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 ADGRE3Q9BY15 652 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 GPR61Q9BZJ8 451 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 TRIM2Q9C040 744 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 MMP27Q9H306 513 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 RPF2Q9H7B2 306 aaKnown RBP4.27□□□□□ -1.73
SF3B1-202ENST00000409915 NOL11Q9H8H0 719 aaKnown RBP4.27□□□□□ -1.73
SF3B1-202ENST00000409915 GPN2Q9H9Y4 310 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-202ENST00000409915 FGF22Q9HCT0 170 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 BPIFA1Q9NP55 256 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 AKIP1Q9NQ31 210 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 MRPL40Q9NQ50 206 aaKnown RBP4.27□□□□□ -1.73
SF3B1-202ENST00000409915 SLC22A11Q9NSA0 550 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 DLL3Q9NYJ7 618 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 ENPP5Q9UJA9 477 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 NDRG4Q9ULP0 352 aaKnown RBP4.27□□□□□ -1.73
SF3B1-202ENST00000409915 KCNK6Q9Y257 313 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 PPIL1Q9Y3C6 166 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 KCTD3Q9Y597 815 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 ARL5AQ9Y689 179 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 ASCC3Q8N3C0 2202 aaKnown RBP4.27□□□□□ -1.73
SF3B1-202ENST00000409915 NCOR2Q9Y618 2525 aa4.27□□□□□ -1.73
SF3B1-202ENST00000409915 CNOT1A5YKK6 2376 aaKnown RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 SPTY2D1-AS1A0A0U1RR47 76 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 LOC285095A0A1B0GVY8 99 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 MED19A0JLT2 244 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 MFSD2BA6NFX1 497 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 WIPF3A6NGB9 483 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 C5orf52A6NGY3 159 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 SDR42E2A6NKP2 422 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 CLDN25C9JDP6 229 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 H0Y8G0 127 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 PSMD9O00233 223 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 TXNDC9O14530 226 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 SELENOFO60613 162 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 TRIM13O60858 407 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 PSIP1O75475 530 aaKnown RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 ANXA9O76027 345 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 CLPXO76031 633 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 OR7A10O76100 309 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 H6PDO95479 791 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 APOC1P02654 83 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 F13BP05160 661 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 FGF1P05230 155 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 PRKAR1AP10644 381 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF30P17039 623 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 JUNBP17275 347 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 FUT1P19526 365 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 PRPH2P23942 346 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 CDAP32320 146 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 TRHRP34981 398 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 CA5AP35218 305 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 RPL22P35268 128 aaKnown RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 ADRA1AP35348 466 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 GRIA1P42261 906 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 GPR1P46091 355 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 GNPDA1P46926 289 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 LEPRP48357 1165 aaKnown RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 SPINT3P49223 89 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 ARRB1P49407 418 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 GDI2P50395 445 aaKnown RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 TMBIM6P55061 237 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 GP2P55259 537 aaKnown RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 CLDN6P56747 220 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 CDK3Q00526 305 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 LGALS3BPQ08380 585 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 NAB1Q13506 487 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 PRPSAP1Q14558 356 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 NFATC4Q14934 902 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 RNPS1Q15287 305 aaKnown RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 LTB4RQ15722 352 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 DEFB133Q30KQ1 61 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 IQCCQ4KMZ1 466 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 FAM76BQ5HYJ3 339 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 CXorf66Q5JRM2 361 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 SERTAD4-AS1Q5TG53 156 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 KCTD11Q693B1 232 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 RGS7BPQ6MZT1 257 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 UGT3A1Q6NUS8 523 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 PNCKQ6P2M8 343 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 CASC4Q6P4E1 433 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 XKRXQ6PP77 449 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 ENPP7Q6UWV6 458 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 ARSKQ6UWY0 536 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 TMEM108Q6UXF1 575 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 PLEKHG7Q6ZR37 379 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 MOB3CQ70IA8 216 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 CENPUQ71F23 418 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF767PQ75MW2 155 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF551Q7Z340 670 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 GLT6D1Q7Z4J2 308 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 PIP4P1Q86T03 277 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 GPAT4Q86UL3 456 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 STK32CQ86UX6 486 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 TDRPQ86YL5 185 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 KRTAP1-3Q8IUG1 177 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 FAM219AQ8IW50 185 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms