RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 STAT5AP42229 794 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 ZNF155Q12901 538 aaPredicted RBP18.69■□□□□ 0.58
USP39-204ENST00000409766 SLC13A2Q13183 592 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 GALNT12Q8IXK2 581 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 CACTIN-AS1Q8N1I8 211 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 TMEM163Q8TC26 289 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 PEX11GQ96HA9 241 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 PRSS27Q9BQR3 290 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 TAPBPLQ9BX59 468 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 POLR2J2Q9GZM3 115 aaKnown RBP18.69■□□□□ 0.58
USP39-204ENST00000409766 POLE3Q9NRF9 147 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 IL20Q9NYY1 176 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 TESQ9UGI8 421 aaKnown RBP18.69■□□□□ 0.58
USP39-204ENST00000409766 CLEC2DQ9UHP7 191 aa18.69■□□□□ 0.58
USP39-204ENST00000409766 LMO7DNF2Z398 122 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 HRO43593 1189 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 PIP5K1CO60331 668 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 CTNSO60931 367 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 NSA2O95478 260 aaKnown RBP18.68■□□□□ 0.58
USP39-204ENST00000409766 GKN3PP0CG01 181 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 NXPH1P58417 271 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 IGLV3-21P80748 117 aaPredicted RBP18.68■□□□□ 0.58
USP39-204ENST00000409766 PSG6Q00889 435 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 DEFB133Q30KQ1 61 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 NIPAL1Q6NVV3 410 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 C16orf87Q6PH81 154 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 ZAR1Q86SH2 424 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 ATCAYQ86WG3 371 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 SLC34A3Q8N130 599 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 HSPA12BQ96MM6 686 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 CDX2Q99626 313 aaPredicted RBP18.68■□□□□ 0.58
USP39-204ENST00000409766 NLGN3Q9NZ94 848 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 ERGIC3Q9Y282 383 aa18.68■□□□□ 0.58
USP39-204ENST00000409766 HYKKA2RU49 373 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 TRAPPC13A5PLN9 417 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 SOX30O94993 753 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 KCNK2O95069 426 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 GPR4P46093 362 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 EMDP50402 254 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 GFERP55789 205 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 HNRNPKP61978 463 aaKnown RBP eCLIP18.67■□□□□ 0.58
USP39-204ENST00000409766 MAT1AQ00266 395 aaKnown RBP18.67■□□□□ 0.58
USP39-204ENST00000409766 TSTQ16762 297 aaKnown RBP18.67■□□□□ 0.58
USP39-204ENST00000409766 PTCRAQ6ISU1 281 aaPredicted RBP18.67■□□□□ 0.58
USP39-204ENST00000409766 OGFOD3Q6PK18 319 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 USP43Q70EL4 1123 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 ZNF595Q8IYB9 648 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 OR6Q1Q8NGQ2 317 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 OSTF1Q92882 214 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 RIT1Q92963 219 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 LMF2Q9BU23 707 aaKnown RBP18.67■□□□□ 0.58
USP39-204ENST00000409766 HMG20AQ9NP66 347 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 WNT16Q9UBV4 365 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 PLCL2Q9UPR0 1127 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 MRPS33Q9Y291 106 aaKnown RBP18.67■□□□□ 0.58
USP39-204ENST00000409766 CLDN16Q9Y5I7 305 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 IGHV5-51A0A0C4DH38 117 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 BLACEA4D250 179 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 CCRL2O00421 344 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 ARHGAP33O14559 1287 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 CDC123O75794 336 aaPredicted RBP18.67■□□□□ 0.58
USP39-204ENST00000409766 CKMT1AP12532 417 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 GNSP15586 552 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 PLAURQ03405 335 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 STX4Q12846 297 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 ZNF846Q147U1 533 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 NR1D2Q14995 579 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 SSX1Q16384 188 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 SOWAHCQ53LP3 525 aaPredicted RBP18.67■□□□□ 0.58
USP39-204ENST00000409766 CLEC12AQ5QGZ9 265 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 NANOGP1Q8N7R0 232 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 S100ZQ8WXG8 99 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 RBM18Q96H35 190 aaKnown RBP18.67■□□□□ 0.58
USP39-204ENST00000409766 DACH2Q96NX9 599 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 OPALINQ96PE5 141 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 TGM7Q96PF1 710 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 MRPS18AQ9NVS2 196 aaKnown RBP18.67■□□□□ 0.58
USP39-204ENST00000409766 DIMT1Q9UNQ2 313 aaKnown RBP18.67■□□□□ 0.58
USP39-204ENST00000409766 SPAG17Q6Q759 2223 aa18.67■□□□□ 0.58
USP39-204ENST00000409766 LOC100506127A0A0U1RQW1 187 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 TLCD2A6NGC4 264 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 FMO6PO60774 539 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 CSO75390 466 aaKnown RBP18.66■□□□□ 0.58
USP39-204ENST00000409766 SCG5P05408 212 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 MLLT3P42568 568 aaPredicted RBP18.66■□□□□ 0.58
USP39-204ENST00000409766 RNF144AP50876 292 aaPredicted RBP18.66■□□□□ 0.58
USP39-204ENST00000409766 SPHARQ15513 63 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 OR1Q1Q15612 314 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 GARNL3Q5VVW2 1013 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 ZNF620Q6ZNG0 422 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 IGFN1Q86VF2 1251 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 TMCO5AQ8N6Q1 288 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 PROKR2Q8NFJ6 384 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 OR6C4Q8NGE1 309 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 OR52I1Q8NGK6 324 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 ADAMTS18Q8TE60 1221 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 SHDQ96IW2 340 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 SLC38A2Q96QD8 506 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 CENPOQ9BU64 300 aa18.66■□□□□ 0.58
USP39-204ENST00000409766 MND1Q9BWT6 205 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms