RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 YRDCQ86U90 279 aaKnown RBP28.36■■■□□ 2.13
TRAF3IP1-203ENST00000409739 MARCH3Q86UD3 253 aa28.36■■■□□ 2.13
TRAF3IP1-203ENST00000409739 EID3Q8N140 333 aa28.36■■■□□ 2.13
TRAF3IP1-203ENST00000409739 FADS6Q8N9I5 356 aa28.36■■■□□ 2.13
TRAF3IP1-203ENST00000409739 OR4C3Q8NH37 302 aa28.36■■■□□ 2.13
TRAF3IP1-203ENST00000409739 INPP5KQ9BT40 448 aa28.36■■■□□ 2.13
TRAF3IP1-203ENST00000409739 TBL1XR1Q9BZK7 514 aa28.36■■■□□ 2.13
TRAF3IP1-203ENST00000409739 MED4Q9NPJ6 270 aa28.36■■■□□ 2.13
TRAF3IP1-203ENST00000409739 SLC6A5Q9Y345 797 aa28.36■■■□□ 2.13
TRAF3IP1-203ENST00000409739 SETXQ7Z333 2677 aaKnown RBP28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 A1L4Q6 167 aa28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 TBXA2RP21731 343 aa28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 LCN1P31025 176 aa28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 CDKN2CP42773 168 aa28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 CRYZQ08257 329 aaKnown RBP28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 LRRC74AQ0VAA2 488 aa28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 WLSQ5T9L3 541 aa28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 SAXO2Q658L1 398 aa28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 ARFGAP2Q8N6H7 521 aa28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 OR4K17Q8NGC6 315 aa28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 MIPOL1Q8TD10 442 aa28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 PHF10Q8WUB8 498 aaKnown RBP28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 ITLN2Q8WWU7 325 aaPredicted RBP28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 THOC1Q96FV9 657 aaKnown RBP28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 PANX1Q96RD7 426 aa28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 SLC35A5Q9BS91 424 aa28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 SDHAF3Q9NRP4 125 aa28.35■■■□□ 2.13
TRAF3IP1-203ENST00000409739 FIGNL2A6NMB9 653 aa28.34■■■□□ 2.13
TRAF3IP1-203ENST00000409739 SRD5A2P31213 254 aa28.34■■■□□ 2.13
TRAF3IP1-203ENST00000409739 RPTNQ6XPR3 784 aa28.34■■■□□ 2.13
TRAF3IP1-203ENST00000409739 MARVELD2Q8N4S9 558 aa28.34■■■□□ 2.13
TRAF3IP1-203ENST00000409739 OR2M3Q8NG83 312 aa28.34■■■□□ 2.13
TRAF3IP1-203ENST00000409739 STON2Q8WXE9 905 aa28.34■■■□□ 2.13
TRAF3IP1-203ENST00000409739 NEURL3Q96EH8 262 aa28.34■■■□□ 2.13
TRAF3IP1-203ENST00000409739 PCDHGB3Q9Y5G1 929 aa28.34■■■□□ 2.13
TRAF3IP1-203ENST00000409739 CCDC154A6NI56 674 aa28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 ALG1L2C9J202 215 aa28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 CLDN1O95832 211 aa28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 ANGPTL1O95841 491 aa28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 POLR2JP52435 117 aaKnown RBP28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 CASP9P55211 416 aa28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 STX1BP61266 288 aa28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 NHSL2Q5HYW2 709 aa28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 ZNF585AQ6P3V2 769 aa28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 RPRMLQ8N4K4 120 aa28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 OR14L1PQ8NHC6 308 aa28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 DTNBP1Q96EV8 351 aa28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 OR51I1Q9H343 314 aa28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 DSN1Q9H410 356 aa28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 UBQLN4Q9NRR5 601 aa28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 DKKL1Q9UK85 242 aa28.33■■■□□ 2.13
TRAF3IP1-203ENST00000409739 KIAA1549Q9HCM3 1950 aa28.32■■■□□ 2.12
TRAF3IP1-203ENST00000409739 ATP8B1O43520 1251 aa28.32■■■□□ 2.12
TRAF3IP1-203ENST00000409739 C1QCP02747 245 aa28.32■■■□□ 2.12
TRAF3IP1-203ENST00000409739 ATP6V1C1P21283 382 aa28.32■■■□□ 2.12
TRAF3IP1-203ENST00000409739 ACVR2AP27037 513 aa28.32■■■□□ 2.12
TRAF3IP1-203ENST00000409739 CHI3L1P36222 383 aaPredicted RBP28.32■■■□□ 2.12
TRAF3IP1-203ENST00000409739 TIGD2Q4W5G0 525 aa28.32■■■□□ 2.12
TRAF3IP1-203ENST00000409739 DCST1Q5T197 706 aa28.32■■■□□ 2.12
TRAF3IP1-203ENST00000409739 RFWD2Q8NHY2 731 aa28.32■■■□□ 2.12
TRAF3IP1-203ENST00000409739 DUSP19Q8WTR2 217 aa28.32■■■□□ 2.12
TRAF3IP1-203ENST00000409739 NPHS2Q9NP85 383 aa28.32■■■□□ 2.12
TRAF3IP1-203ENST00000409739 TAS2R10Q9NYW0 307 aa28.32■■■□□ 2.12
TRAF3IP1-203ENST00000409739 MED11Q9P086 117 aa28.32■■■□□ 2.12
TRAF3IP1-203ENST00000409739 IGLV3-32A0A0A0MS00 114 aa28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 FAM234BA2RU67 622 aa28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 DUXAA6NLW8 204 aa28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 BMP7P18075 431 aa28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 C17orf67Q0P5P2 114 aa28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 VASNQ6EMK4 673 aa28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 MSANTD1Q6ZTZ1 278 aa28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 MRGPRGQ86SM5 289 aa28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 ZNF808Q8N4W9 903 aaPredicted RBP28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 TRIML2Q8N7C3 387 aa28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 CHDHQ8NE62 594 aaPredicted RBP28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 TIMP4Q99727 224 aa28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 UGT2B28Q9BY64 529 aa28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 PLEKHB1Q9UF11 243 aaPredicted RBP28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 DCTN4Q9UJW0 460 aa28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 MRPS18CQ9Y3D5 142 aaKnown RBP28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 FAM215AQ9Y5M1 114 aa28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 HEATR5AQ86XA9 2040 aa28.31■■■□□ 2.12
TRAF3IP1-203ENST00000409739 NPIPA5A0A0B4J1W7 369 aa28.3■■■□□ 2.12
TRAF3IP1-203ENST00000409739 NPIPA7E9PJI5 369 aa28.3■■■□□ 2.12
TRAF3IP1-203ENST00000409739 RFXANKO14593 260 aa28.3■■■□□ 2.12
TRAF3IP1-203ENST00000409739 WDR1O75083 606 aa28.3■■■□□ 2.12
TRAF3IP1-203ENST00000409739 GSNP06396 782 aa28.3■■■□□ 2.12
TRAF3IP1-203ENST00000409739 NPIPA8P0DM63 369 aa28.3■■■□□ 2.12
TRAF3IP1-203ENST00000409739 DPP4P27487 766 aa28.3■■■□□ 2.12
TRAF3IP1-203ENST00000409739 DSCR4P56555 118 aaPredicted RBP28.3■■■□□ 2.12
TRAF3IP1-203ENST00000409739 RTL6Q6ICC9 239 aa28.3■■■□□ 2.12
TRAF3IP1-203ENST00000409739 TNFAIP8L2Q6P589 184 aaPredicted RBP28.3■■■□□ 2.12
TRAF3IP1-203ENST00000409739 DNAJC14Q6Y2X3 702 aaPredicted RBP28.3■■■□□ 2.12
TRAF3IP1-203ENST00000409739 IFNEQ86WN2 208 aa28.3■■■□□ 2.12
TRAF3IP1-203ENST00000409739 GATSQ8NAP1 163 aa28.3■■■□□ 2.12
TRAF3IP1-203ENST00000409739 VPS33AQ96AX1 596 aa28.3■■■□□ 2.12
TRAF3IP1-203ENST00000409739 SDF2Q99470 211 aa28.3■■■□□ 2.12
TRAF3IP1-203ENST00000409739 SCDO00767 359 aa28.29■■■□□ 2.12
TRAF3IP1-203ENST00000409739 NDUFB5O43674 189 aa28.29■■■□□ 2.12
TRAF3IP1-203ENST00000409739 AK1P00568 194 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms