RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 MYF5P13349 255 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 PRG2P13727 222 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 STT3AP46977 705 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 OMPP47874 163 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 PGDP52209 483 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 HSD17B7P56937 341 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 PSG6Q00889 435 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 DEFB123Q8N688 67 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 TOR1AIP2Q8NFQ8 470 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 TMEM255BQ8WV15 326 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 CUTCQ9NTM9 273 aa19.22■□□□□ 0.67
USP39-203ENST00000409470 ZNF749O43361 778 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 PRAMEF2O60811 474 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 CD36P16671 472 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 ALAS2P22557 587 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 PCYT1AP49585 367 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 NR1D2Q14995 579 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 TIGD6Q17RP2 521 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 TMEM201Q5SNT2 666 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 TTLL10Q6ZVT0 673 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 MBOAT2Q6ZWT7 520 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 ZAR1Q86SH2 424 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 NRMQ8IXM6 262 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 ZNF614Q8N883 585 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 PLA2G12AQ9BZM1 189 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 DSN1Q9H410 356 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 SLC25A19Q9HC21 320 aa19.21■□□□□ 0.67
USP39-203ENST00000409470 TRAPPC13A5PLN9 417 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 TLX2O43763 284 aaPredicted RBP19.2■□□□□ 0.66
USP39-203ENST00000409470 CNOT3O75175 753 aaKnown RBP19.2■□□□□ 0.66
USP39-203ENST00000409470 DHPSP49366 369 aaPredicted RBP19.2■□□□□ 0.66
USP39-203ENST00000409470 ARRB1P49407 418 aaPredicted RBP19.2■□□□□ 0.66
USP39-203ENST00000409470 LSM3P62310 102 aaKnown RBP19.2■□□□□ 0.66
USP39-203ENST00000409470 CDK5Q00535 292 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 ACSM5Q6NUN0 579 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 C11orf74Q86VG3 221 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 RNF217Q8TC41 542 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 VSTM2LQ96N03 204 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 POLDIP3Q9BY77 421 aaKnown RBP19.2■□□□□ 0.66
USP39-203ENST00000409470 ERVK-19Q9WJR5 959 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 CLDN16Q9Y5I7 305 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 PRKYO43930 277 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 FOXD2O60548 495 aaPredicted RBP19.2■□□□□ 0.66
USP39-203ENST00000409470 ADORA3P0DMS8 318 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 GPR3P46089 330 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 GPR4P46093 362 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 EMP3P54852 163 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 CFHR1Q03591 330 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 SNAPC1Q16533 368 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 LYSMD4Q5XG99 296 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 PLAG1Q6DJT9 500 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 SLC27A4Q6P1M0 643 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 RASSF6Q6ZTQ3 369 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 CARFQ8N187 725 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 OR4N2Q8NGD1 307 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 C9orf43Q8TAL5 461 aaPredicted RBP19.2■□□□□ 0.66
USP39-203ENST00000409470 CRELD1Q96HD1 420 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 ELF4Q99607 663 aaPredicted RBP19.2■□□□□ 0.66
USP39-203ENST00000409470 POLR2J2Q9GZM3 115 aaKnown RBP19.2■□□□□ 0.66
USP39-203ENST00000409470 KRCC1Q9NPI7 259 aaPredicted RBP19.2■□□□□ 0.66
USP39-203ENST00000409470 MUTYHQ9UIF7 546 aa19.2■□□□□ 0.66
USP39-203ENST00000409470 C19orf67A6NJJ6 358 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 A8MU76 341 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 SLC22A1O15245 554 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 PIP5K1CO60331 668 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 PTHP01270 115 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 PIPP12273 146 aaPredicted RBP19.19■□□□□ 0.66
USP39-203ENST00000409470 FPR3P25089 353 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 HTR2AP28223 471 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 SLC15A1P46059 708 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 GPLD1P80108 840 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 SERTAD2Q14140 314 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 IRF3Q14653 427 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 OR1Q1Q15612 314 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 PDZK1Q5T2W1 519 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 MFSD4BQ5TF39 518 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 BCDIN3DQ7Z5W3 292 aaKnown RBP19.19■□□□□ 0.66
USP39-203ENST00000409470 GAB3Q8WWW8 586 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 ZNF578Q96N58 590 aaPredicted RBP19.19■□□□□ 0.66
USP39-203ENST00000409470 IER2Q9BTL4 223 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 NECTIN3Q9NQS3 549 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 TAS2R16Q9NYV7 291 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 NLGN3Q9NZ94 848 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 DTX4Q9Y2E6 619 aa19.19■□□□□ 0.66
USP39-203ENST00000409470 RPL36Q9Y3U8 105 aaKnown RBP19.19■□□□□ 0.66
USP39-203ENST00000409470 GIMD1P0DJR0 217 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 GNSP15586 552 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 PTNP21246 168 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 TGFBR2P37173 567 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 LIPAP38571 399 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 STAT5AP42229 794 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 OR1D4P47884 311 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 OCLNQ16625 522 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 FAM26EQ8N5C1 309 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 TBC1D15Q8TC07 691 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 CDCA4Q9BXL8 241 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 Q9N2J8 555 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 M0R082 166 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 CSF2RBP32927 897 aa19.18■□□□□ 0.66
USP39-203ENST00000409470 VBP1P61758 197 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms