RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 SCN2BO60939 215 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 GJB5O95377 273 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 MLYCDO95822 493 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 DNTTP04053 509 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 FABP1P07148 127 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 PRR35P0CG20 571 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 ODC1P11926 461 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 PIPP12273 146 aaPredicted RBP5.11□□□□□ -1.59
CLK1-202ENST00000409403 AKR1A1P14550 325 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 AZGP1P25311 298 aaKnown RBP5.11□□□□□ -1.59
CLK1-202ENST00000409403 CST5P28325 142 aaPredicted RBP5.11□□□□□ -1.59
CLK1-202ENST00000409403 AKT1P31749 480 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 ADRA1BP35368 520 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 AVPR1AP37288 418 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 MAPK9P45984 424 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 TGM4P49221 684 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 ZNF81P51508 661 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 AIF1P55008 147 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 NPRL3Q12980 569 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 LCP2Q13094 533 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 C1DQ13901 141 aaKnown RBP5.11□□□□□ -1.59
CLK1-202ENST00000409403 SIM2Q14190 667 aaPredicted RBP5.11□□□□□ -1.59
CLK1-202ENST00000409403 CSHL1Q14406 222 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 FGFBP1Q14512 234 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 IRF3Q14653 427 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 VEPH1Q14D04 833 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 CDO1Q16878 200 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 TEX30Q5JUR7 227 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 PCID2Q5JVF3 399 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 CDKL4Q5MAI5 379 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 LY6G5CQ5SRR4 150 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 ATG9BQ674R7 924 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 CLEC6AQ6EIG7 209 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 OR2T5Q6IEZ7 315 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 BHLHB9Q6PI77 547 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 AFTPHQ6ULP2 937 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 CES3Q6UWW8 571 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 TMEM107Q6UX40 140 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 PID1Q7Z2X4 250 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 BNIPLQ7Z465 357 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 ZDHHC21Q8IVQ6 265 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 LAX1Q8IWV1 398 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 ADGRF3Q8IZF5 1079 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 STPG2Q8N412 459 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 C7orf57Q8NEG2 295 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 ZNF548Q8NEK5 533 aaPredicted RBP5.11□□□□□ -1.59
CLK1-202ENST00000409403 OR4A15Q8NGL6 344 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 OR2T29Q8NH02 315 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 PROKR1Q8TCW9 393 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 NSMAFQ92636 917 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 UCN3Q969E3 161 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 R3HDM4Q96D70 268 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 PYURFQ96I23 114 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 MGLLQ99685 303 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 OMDQ99983 421 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 RTP3Q9BQQ7 232 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 MED18Q9BUE0 208 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 DPCDQ9BVM2 203 aaPredicted RBP5.11□□□□□ -1.59
CLK1-202ENST00000409403 HEXA-AS1Q9H8Q6 139 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 FBRSL1Q9HCM7 1045 aaKnown RBP5.11□□□□□ -1.59
CLK1-202ENST00000409403 FSCN3Q9NQT6 498 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 SLC2A4RGQ9NR83 387 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 HEBP1Q9NRV9 189 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 ABCC13Q9NSE7 274 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 IMP3Q9NV31 184 aaKnown RBP5.11□□□□□ -1.59
CLK1-202ENST00000409403 EXD2Q9NVH0 621 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 DNAJC11Q9NVH1 559 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 CYB5R1Q9UHQ9 305 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 SCP2D1Q9UJQ7 156 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 RPS6KA6Q9UK32 745 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 SH2B3Q9UQQ2 575 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 DERAQ9Y315 318 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 DNAJC15Q9Y5T4 150 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 MAGED1Q9Y5V3 778 aaPredicted RBP5.11□□□□□ -1.59
CLK1-202ENST00000409403 PLXNA4Q9HCM2 1894 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 A0A0U1RQS6 177 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 SLC22A23A1A5C7 686 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 HYKKA2RU49 373 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 C7orf66A4D0T2 115 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 ASPDHA6ND91 283 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 DDX39AO00148 427 aaKnown RBP5.1□□□□□ -1.59
CLK1-202ENST00000409403 CASC3O15234 703 aaKnown RBP5.1□□□□□ -1.59
CLK1-202ENST00000409403 PLA2G10O15496 165 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 SGCEO43556 437 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 CHP2O43745 196 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 WBP4O75554 376 aaKnown RBP5.1□□□□□ -1.59
CLK1-202ENST00000409403 ATP6AP2O75787 350 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 ONECUT2O95948 504 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 CSF2P04141 144 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 IL6RP08887 468 aaPredicted RBP5.1□□□□□ -1.59
CLK1-202ENST00000409403 FGF2P09038 288 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 ZNF37AP17032 561 aaPredicted RBP5.1□□□□□ -1.59
CLK1-202ENST00000409403 CTPS1P17812 591 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 GGT2P36268 569 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 MMP12P39900 470 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 VEGFCP49767 419 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 GPR143P51810 404 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 RAG2P55895 527 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 BLOC1S1P78537 153 aa5.1□□□□□ -1.59
CLK1-202ENST00000409403 ABATP80404 500 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms