RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 IGFBP1P08833 259 aaPredicted RBP17.59■□□□□ 0.41
USP39-202ENST00000409025 FBLP22087 321 aaKnown RBP17.59■□□□□ 0.41
USP39-202ENST00000409025 ZNF136P52737 540 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 LSAMPQ13449 338 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 DSG2Q14126 1118 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 MFSD4BQ5TF39 518 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 GUSBP11Q6P575 273 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 PIGXQ8TBF5 258 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 ACOT11Q8WXI4 607 aaPredicted RBP17.59■□□□□ 0.41
USP39-202ENST00000409025 MYDGFQ969H8 173 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 C12orf43Q96C57 262 aaKnown RBP17.59■□□□□ 0.41
USP39-202ENST00000409025 ZNF501Q96CX3 271 aaPredicted RBP17.59■□□□□ 0.41
USP39-202ENST00000409025 COPS4Q9BT78 406 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 ZNF304Q9HCX3 659 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 FGF21Q9NSA1 209 aa17.59■□□□□ 0.41
USP39-202ENST00000409025 UNC13CQ8NB66 2214 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 ARID1BQ8NFD5 2236 aaPredicted RBP17.58■□□□□ 0.4
USP39-202ENST00000409025 M0R129 80 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 TRMUO75648 421 aaKnown RBP17.58■□□□□ 0.4
USP39-202ENST00000409025 TP53P04637 393 aaPredicted RBP17.58■□□□□ 0.4
USP39-202ENST00000409025 LSM11P83369 360 aaKnown RBP eCLIP17.58■□□□□ 0.4
USP39-202ENST00000409025 MVKQ03426 396 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 SQSTM1Q13501 440 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 PRAMEF17Q5VTA0 474 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 PEAR1Q5VY43 1037 aaPredicted RBP17.58■□□□□ 0.4
USP39-202ENST00000409025 CASP12Q6UXS9 341 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 ZAR1Q86SH2 424 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 ERI1Q8IV48 349 aaKnown RBP17.58■□□□□ 0.4
USP39-202ENST00000409025 GALNT15Q8N3T1 639 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 C16orf52Q8NHV5 167 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 FAR1Q8WVX9 515 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 RORBQ92753 470 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 DPYSL5Q9BPU6 564 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 GAREM1Q9H706 876 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 CLN6Q9NWW5 311 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 PRODH2Q9UF12 536 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 DTX4Q9Y2E6 619 aa17.58■□□□□ 0.4
USP39-202ENST00000409025 PI4KAP42356 2102 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 CABIN1Q9Y6J0 2220 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 SH3D21A4FU49 640 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 ENO4A6NNW6 628 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 CLCA1A8K7I4 914 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 C17orf105B2RV13 164 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 PERM1Q5SV97 790 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 C12orf73Q69YU5 71 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 QSOX2Q6ZRP7 698 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 PRICKLE2Q7Z3G6 844 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 NKAIN4Q8IVV8 208 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 C7orf57Q8NEG2 295 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 OR7G1Q8NGA0 311 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 OR4N2Q8NGD1 307 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 DOK1Q99704 481 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 G6PC3Q9BUM1 346 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 PNO1Q9NRX1 252 aaKnown RBP17.57■□□□□ 0.4
USP39-202ENST00000409025 ATXN7L1Q9ULK2 861 aaPredicted RBP17.57■□□□□ 0.4
USP39-202ENST00000409025 SLC6A14Q9UN76 642 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 LY6G6EA0A0G2JKS1 128 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 A0A1B0GX78 115 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 TRAPPC13A5PLN9 417 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 FMO6PO60774 539 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 INMTO95050 263 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 MAP2K4P45985 399 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 TMBIM6P55061 237 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 MINDY4Q4G0A6 757 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 NPSR1Q6W5P4 371 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 CCDC81Q6ZN84 652 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 ZNF615Q8N8J6 731 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 FAM181AQ8N9Y4 354 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 RCBTB1Q8NDN9 531 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 TRUB1Q8WWH5 349 aaKnown RBP17.57■□□□□ 0.4
USP39-202ENST00000409025 GGHQ92820 318 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 ZC3H10Q96K80 434 aaKnown RBP17.57■□□□□ 0.4
USP39-202ENST00000409025 SIGLEC11Q96RL6 698 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 GPA33Q99795 319 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 AMBNQ9NP70 447 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 FKBP14Q9NWM8 211 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 WARS2Q9UGM6 360 aaKnown RBP17.57■□□□□ 0.4
USP39-202ENST00000409025 SLC7A7Q9UM01 511 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 U3KQA8 63 aa17.57■□□□□ 0.4
USP39-202ENST00000409025 ASXL3Q9C0F0 2248 aa17.56■□□□□ 0.4
USP39-202ENST00000409025 DYRK3O43781 588 aa17.56■□□□□ 0.4
USP39-202ENST00000409025 FADS2O95864 444 aaKnown RBP17.56■□□□□ 0.4
USP39-202ENST00000409025 IGKV1D-16P01601 117 aa17.56■□□□□ 0.4
USP39-202ENST00000409025 THY1P04216 161 aa17.56■□□□□ 0.4
USP39-202ENST00000409025 GKN3PP0CG01 181 aa17.56■□□□□ 0.4
USP39-202ENST00000409025 PRG2P13727 222 aa17.56■□□□□ 0.4
USP39-202ENST00000409025 PCSK6P29122 969 aa17.56■□□□□ 0.4
USP39-202ENST00000409025 NUDT6P53370 316 aa17.56■□□□□ 0.4
USP39-202ENST00000409025 SNRPGP62308 76 aaKnown RBP17.56■□□□□ 0.4
USP39-202ENST00000409025 TSPAN31Q12999 210 aa17.56■□□□□ 0.4
USP39-202ENST00000409025 PDZK1Q5T2W1 519 aa17.56■□□□□ 0.4
USP39-202ENST00000409025 ARHGAP40Q5TG30 622 aa17.56■□□□□ 0.4
USP39-202ENST00000409025 ZNF574Q6ZN55 896 aaPredicted RBP17.56■□□□□ 0.4
USP39-202ENST00000409025 ZNF614Q8N883 585 aa17.56■□□□□ 0.4
USP39-202ENST00000409025 LIN28AQ9H9Z2 209 aaKnown RBP17.56■□□□□ 0.4
USP39-202ENST00000409025 KRCC1Q9NPI7 259 aaPredicted RBP17.56■□□□□ 0.4
USP39-202ENST00000409025 TESQ9UGI8 421 aaKnown RBP17.56■□□□□ 0.4
USP39-202ENST00000409025 OR10H1Q9Y4A9 318 aa17.56■□□□□ 0.4
USP39-202ENST00000409025 RP1P56715 2156 aa17.56■□□□□ 0.4
USP39-202ENST00000409025 ADAMTS20P59510 1910 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms