RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 FAM181AQ8N9Y4 354 aa14.22□□□□□ -0.13
LIMK2-204ENST00000406516 TMEM145Q8NBT3 493 aa14.22□□□□□ -0.13
LIMK2-204ENST00000406516 NUP43Q8NFH3 380 aa14.22□□□□□ -0.13
LIMK2-204ENST00000406516 OR52E1Q8NGJ3 308 aa14.22□□□□□ -0.13
LIMK2-204ENST00000406516 SLC22A4Q9H015 551 aa14.22□□□□□ -0.13
LIMK2-204ENST00000406516 C11orf54Q9H0W9 315 aaPredicted RBP14.22□□□□□ -0.13
LIMK2-204ENST00000406516 SNRNP200O75643 2136 aaKnown RBP14.22□□□□□ -0.13
LIMK2-204ENST00000406516 PLRG1O43660 514 aaKnown RBP14.21□□□□□ -0.13
LIMK2-204ENST00000406516 CSF2P04141 144 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 CSNK2A2P19784 350 aaPredicted RBP14.21□□□□□ -0.13
LIMK2-204ENST00000406516 IFNGR2P38484 337 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 CDH11P55287 796 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TGM3Q08188 693 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TSPAN31Q12999 210 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TPBGQ13641 420 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TCEA2Q15560 299 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TBRG1Q3YBR2 411 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 ZFP69Q49AA0 526 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 GALNT6Q8NCL4 622 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 OR4F15Q8NGB8 312 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 OR2L8Q8NGY9 312 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 ST6GAL2Q96JF0 529 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 GPR174Q9BXC1 333 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 MRPS18AQ9NVS2 196 aaKnown RBP14.21□□□□□ -0.13
LIMK2-204ENST00000406516 SPHK1Q9NYA1 384 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 COMMD3Q9UBI1 195 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 EXOSC1Q9Y3B2 195 aaKnown RBP14.21□□□□□ -0.13
LIMK2-204ENST00000406516 KMT2EQ8IZD2 1858 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TBC1D3DA0A087WVF3 549 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TBC1D3IA0A087WXS9 549 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TBC1D3EA0A087X179 549 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TBC1D3KA0A087X1G2 549 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TBC1D3FA6NER0 549 aaPredicted RBP14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TBC1D3LB9A6J9 549 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 EMC8O43402 210 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 LALBAP00709 142 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TBC1D3HP0C7X1 549 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 CCNYL3P0C7X3 344 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 GPR4P46093 362 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 MRPS15P82914 257 aaKnown RBP14.21□□□□□ -0.13
LIMK2-204ENST00000406516 FGL2Q14314 439 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 C6orf183Q5T699 404 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TBC1D3GQ6DHY5 549 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 MRM1Q6IN84 353 aaKnown RBP14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TBC1D3CQ6IPX1 549 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 SLC48A1Q6P1K1 146 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 C16orf62Q7Z3J2 963 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 NKAIN4Q8IVV8 208 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TBC1D3Q8IZP1 549 aaPredicted RBP14.21□□□□□ -0.13
LIMK2-204ENST00000406516 OR2L5Q8NG80 312 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 DIO2Q92813 273 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 DCLRE1CQ96SD1 692 aaKnown RBP14.21□□□□□ -0.13
LIMK2-204ENST00000406516 TMED9Q9BVK6 235 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 C6orf106Q9H6K1 298 aaPredicted RBP14.21□□□□□ -0.13
LIMK2-204ENST00000406516 MALT1Q9UDY8 824 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 SNX7Q9UNH6 387 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 CLCA2Q9UQC9 943 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 CHST2Q9Y4C5 530 aa14.21□□□□□ -0.13
LIMK2-204ENST00000406516 IRGMA1A4Y4 181 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 CCDC182A6NF36 153 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 CASKO14936 926 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 FCMRO60667 390 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 F3P13726 295 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 TRIM23P36406 574 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 ASAH1Q13510 395 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 HSDL2Q6YN16 418 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 RASSF6Q6ZTQ3 369 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 ATP6V1C2Q8NEY4 427 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 OR2L3Q8NG85 312 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 OR4Q3Q8NH05 313 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 PIGXQ8TBF5 258 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 TP53INP1Q96A56 240 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 ARHGDIGQ99819 225 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 OR2B2Q9GZK3 357 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 CES1P1Q9UKY3 287 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 GSTK1Q9Y2Q3 226 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 KDM4EB2RXH2 506 aaPredicted RBP14.2□□□□□ -0.14
LIMK2-204ENST00000406516 FAM47E-STBD1D6RA91 191 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 POLR1CO15160 346 aaPredicted RBP14.2□□□□□ -0.14
LIMK2-204ENST00000406516 GUCY1B2O75343 617 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 GABRA5P31644 462 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 SLC1A3P43003 542 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 OMPP47874 163 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 ST3GAL3Q11203 375 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 ZNF528Q3MIS6 628 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 DGLUCYQ7Z3D6 616 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 MRGPREQ86SM8 312 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 AP3S1Q92572 193 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 ELP4Q96EB1 424 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 ARHGAP9Q9BRR9 750 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 HDHD5Q9BXW7 423 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 PHPT1Q9NRX4 125 aaPredicted RBP14.2□□□□□ -0.14
LIMK2-204ENST00000406516 GIMAP4Q9NUV9 329 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 APOBEC3BQ9UH17 382 aaKnown RBP14.2□□□□□ -0.14
LIMK2-204ENST00000406516 GPSM3Q9Y4H4 160 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 DNAH14Q0VDD8 3507 aa14.2□□□□□ -0.14
LIMK2-204ENST00000406516 SYT5O00445 386 aa14.19□□□□□ -0.14
LIMK2-204ENST00000406516 PIP5K1CO60331 668 aa14.19□□□□□ -0.14
LIMK2-204ENST00000406516 NCR1O76036 304 aa14.19□□□□□ -0.14
LIMK2-204ENST00000406516 ZIC2O95409 532 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms