RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 TRILQ7L0X0 811 aa10.02□□□□□ -0.8
CLIP4-204ENST00000404424 CXXC5Q7LFL8 322 aaKnown RBP10.02□□□□□ -0.8
CLIP4-204ENST00000404424 ADGRD2Q7Z7M1 963 aa10.02□□□□□ -0.8
CLIP4-204ENST00000404424 YIPF7Q8N8F6 280 aa10.02□□□□□ -0.8
CLIP4-204ENST00000404424 ZFAND1Q8TCF1 268 aa10.02□□□□□ -0.8
CLIP4-204ENST00000404424 BRIX1Q8TDN6 353 aaKnown RBP10.02□□□□□ -0.8
CLIP4-204ENST00000404424 GANCQ8TET4 914 aa10.02□□□□□ -0.8
CLIP4-204ENST00000404424 SENP5Q96HI0 755 aaPredicted RBP10.02□□□□□ -0.8
CLIP4-204ENST00000404424 MS4A4EQ96PG1 132 aa10.02□□□□□ -0.8
CLIP4-204ENST00000404424 RNF32Q9H0A6 362 aa10.02□□□□□ -0.8
CLIP4-204ENST00000404424 B3GAT2Q9NPZ5 323 aa10.02□□□□□ -0.8
CLIP4-204ENST00000404424 HINT3Q9NQE9 182 aaKnown RBP10.02□□□□□ -0.8
CLIP4-204ENST00000404424 RPRD1BQ9NQG5 326 aaKnown RBP10.02□□□□□ -0.8
CLIP4-204ENST00000404424 ACOXLQ9NUZ1 547 aa10.02□□□□□ -0.8
CLIP4-204ENST00000404424 ING3Q9NXR8 418 aa10.02□□□□□ -0.8
CLIP4-204ENST00000404424 PTGFRNQ9P2B2 879 aa10.02□□□□□ -0.8
CLIP4-204ENST00000404424 APOBEC3BQ9UH17 382 aaKnown RBP10.02□□□□□ -0.8
CLIP4-204ENST00000404424 ALG5Q9Y673 324 aa10.02□□□□□ -0.8
CLIP4-204ENST00000404424 CSNK1G3Q9Y6M4 447 aa10.02□□□□□ -0.8
CLIP4-204ENST00000404424 A0A1W2PS29 197 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 PRR19A6NJB7 356 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 GTPBP1O00178 669 aaKnown RBP10.02□□□□□ -0.81
CLIP4-204ENST00000404424 MID1O15344 667 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 RNF13O43567 381 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 FCMRO60667 390 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 ZIC2O95409 532 aaPredicted RBP10.02□□□□□ -0.81
CLIP4-204ENST00000404424 C1QBP02746 253 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 HOXB3P14651 431 aaPredicted RBP10.02□□□□□ -0.81
CLIP4-204ENST00000404424 CD53P19397 219 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 GZMKP49863 264 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 RAB8AP61006 207 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 TNK1Q13470 666 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 FAM78AQ5JUQ0 283 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 ZNF425Q6IV72 752 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 MFSD12Q6NUT3 480 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 MTSS1LQ765P7 747 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 KLBQ86Z14 1044 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 CPOQ8IVL8 374 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 FAM20CQ8IXL6 584 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 FBXL6Q8N531 539 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 ACBD7Q8N6N7 88 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 BBS1Q8NFJ9 593 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 NLGN4YQ8NFZ3 816 aaPredicted RBP10.02□□□□□ -0.81
CLIP4-204ENST00000404424 TMEM255BQ8WV15 326 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 KCTD12Q96CX2 325 aaKnown RBP10.02□□□□□ -0.81
CLIP4-204ENST00000404424 ASB16Q96NS5 453 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 C1QTNF2Q9BXJ5 285 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 BABAM2Q9NXR7 383 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 NLKQ9UBE8 527 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 KCNK6Q9Y257 313 aa10.02□□□□□ -0.81
CLIP4-204ENST00000404424 CD8B2A6NJW9 211 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 ARHGEF9O43307 516 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 NCR1O76036 304 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 ASGR2P07307 311 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 CD8BP10966 210 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 GCGRP47871 477 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 FZD5Q13467 585 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 ARHGAP11BQ3KRB8 267 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 HBMQ6B0K9 141 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 SYCE2Q6PIF2 218 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 VASH1Q7L8A9 365 aaPredicted RBP10.01□□□□□ -0.81
CLIP4-204ENST00000404424 RNF113BQ8IZP6 322 aaKnown RBP10.01□□□□□ -0.81
CLIP4-204ENST00000404424 LRRC25Q8N386 305 aaPredicted RBP10.01□□□□□ -0.81
CLIP4-204ENST00000404424 KAT2AQ92830 837 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 SMARCD2Q92925 531 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 GAL3ST3Q96A11 431 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 SAMD8Q96LT4 415 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 BEX2Q9BXY8 128 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 UBQLN3Q9H347 655 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 INPP5EQ9NRR6 644 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 MALT1Q9UDY8 824 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 SLC7A7Q9UM01 511 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 WDR45Q9Y484 360 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 HEBP2Q9Y5Z4 205 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 C2orf92A0A1B0GVN3 265 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 SOCS6O14544 535 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 RNGTTO60942 597 aaKnown RBP10.01□□□□□ -0.81
CLIP4-204ENST00000404424 SLC2A10O95528 541 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 NTN1O95631 604 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 PAK4O96013 591 aaPredicted RBP10.01□□□□□ -0.81
CLIP4-204ENST00000404424 THBS1P07996 1170 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 F8A1P23610 371 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 PEBP1P30086 187 aaKnown RBP10.01□□□□□ -0.81
CLIP4-204ENST00000404424 DUSP8Q13202 625 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 MADCAM1Q13477 382 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 EFR3AQ14156 821 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 TRAM1Q15629 374 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 CST6Q15828 149 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 BICRALQ6AI39 1079 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 PAMR1Q6UXH9 720 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 MEPCEQ7L2J0 689 aaKnown RBP10.01□□□□□ -0.81
CLIP4-204ENST00000404424 GET4Q7L5D6 327 aaPredicted RBP10.01□□□□□ -0.81
CLIP4-204ENST00000404424 NANOGNBQ7Z5D8 188 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 RANBP3LQ86VV4 465 aaPredicted RBP10.01□□□□□ -0.81
CLIP4-204ENST00000404424 LRRC28Q86X40 367 aaPredicted RBP10.01□□□□□ -0.81
CLIP4-204ENST00000404424 SIRT6Q8N6T7 355 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 OR52L1Q8NGH7 329 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 OR51G2Q8NGK0 314 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 OR5M3Q8NGP4 307 aa10.01□□□□□ -0.81
CLIP4-204ENST00000404424 CREB3L1Q96BA8 519 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms