RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 TMEM198Q66K66 360 aa16.33■□□□□ 0.2
HDAC11-204ENST00000404040 SLC29A4Q7RTT9 530 aa16.33■□□□□ 0.2
HDAC11-204ENST00000404040 KRTCAP2Q8N6L1 136 aa16.33■□□□□ 0.2
HDAC11-204ENST00000404040 OR8J2Q8NGG1 315 aa16.33■□□□□ 0.2
HDAC11-204ENST00000404040 LINC01560Q8TB33 94 aa16.33■□□□□ 0.2
HDAC11-204ENST00000404040 BEX4Q9NWD9 120 aaPredicted RBP16.33■□□□□ 0.2
HDAC11-204ENST00000404040 ANKRD33BA6NCL7 494 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 MBD3L4A6NDZ8 208 aaPredicted RBP16.32■□□□□ 0.2
HDAC11-204ENST00000404040 MBD3L3A6NE82 208 aaPredicted RBP16.32■□□□□ 0.2
HDAC11-204ENST00000404040 MBD3L5A6NJ08 208 aaPredicted RBP16.32■□□□□ 0.2
HDAC11-204ENST00000404040 CD8B2A6NJW9 211 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 HRGP04196 525 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 IL6P05231 212 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 S100A3P33764 101 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 FUT7Q11130 342 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 SF3B4Q15427 424 aaKnown RBP eCLIP16.32■□□□□ 0.2
HDAC11-204ENST00000404040 PGS1Q32NB8 556 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 ANKRD26P1Q6NSI1 321 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 RNF111Q6ZNA4 994 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 OR7A2PQ8NGA2 310 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 MBD3L2Q8NHZ7 208 aaPredicted RBP16.32■□□□□ 0.2
HDAC11-204ENST00000404040 AMDHD1Q96NU7 426 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 YIPF4Q9BSR8 244 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 UBQLN3Q9H347 655 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 FAM120CQ9NX05 1096 aaKnown RBP16.32■□□□□ 0.2
HDAC11-204ENST00000404040 MAT2BQ9NZL9 334 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 JKAMPQ9P055 326 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 PCDHGB4Q9UN71 923 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 ERVK-19Q9WJR5 959 aa16.32■□□□□ 0.2
HDAC11-204ENST00000404040 RAI1Q7Z5J4 1906 aaPredicted RBP16.31■□□□□ 0.2
HDAC11-204ENST00000404040 A0A087WV62 115 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 A0A1W2PPR1 153 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 A0A1W2PRB8 838 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 PLOD2O00469 737 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 RNASET2O00584 256 aaKnown RBP16.31■□□□□ 0.2
HDAC11-204ENST00000404040 PLOD3O60568 738 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 COQ9O75208 318 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 HPNP05981 417 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 LAMP1P11279 417 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 NCF2P19878 526 aaPredicted RBP16.31■□□□□ 0.2
HDAC11-204ENST00000404040 CTSSP25774 331 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 GPC1P35052 558 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 CDK9P50750 372 aaKnown RBP16.31■□□□□ 0.2
HDAC11-204ENST00000404040 SLC37A1P57057 533 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 UFM1P61960 85 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 ZNF385BQ569K4 471 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 ZNF628Q5EBL2 1059 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 NHSL2Q5HYW2 709 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 SHEQ5VZ18 495 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 VASNQ6EMK4 673 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 CGB2Q6NT52 195 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 FAM180BQ6P0A1 224 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 SPATA21Q7Z572 469 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 CXorf67Q86X51 503 aaPredicted RBP16.31■□□□□ 0.2
HDAC11-204ENST00000404040 OR9A2Q8NGT5 310 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 DOK4Q8TEW6 326 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 OR5P2Q8WZ92 322 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 DIO2Q92813 273 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 CTHRC1Q96CG8 243 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 TRIB1Q96RU8 372 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 GLIPR2Q9H4G4 154 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 PRODH2Q9UF12 536 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 CAMK2AQ9UQM7 478 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 C15orf41Q9Y2V0 281 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 ROS1P08922 2347 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 STAB1Q9NY15 2570 aa16.31■□□□□ 0.2
HDAC11-204ENST00000404040 A0A1W2PS29 197 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 FAM234BA2RU67 622 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 FAM171A2A8MVW0 826 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 TRAPPC6AO75865 159 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 IL18BPO95998 194 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 CLPSP04118 112 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 OPRM1P35372 400 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 AGFG1P52594 562 aaKnown RBP16.3■□□□□ 0.2
HDAC11-204ENST00000404040 SEC24CP53992 1094 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 NME5P56597 212 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 NKX6-1P78426 367 aaPredicted RBP16.3■□□□□ 0.2
HDAC11-204ENST00000404040 POU4F3Q15319 338 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 FAM174BQ3ZCQ3 159 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 DCST1Q5T197 706 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 FNDC7Q5VTL7 733 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 BICRALQ6AI39 1079 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 MSANTD1Q6ZTZ1 278 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 TAGAPQ8N103 731 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 ZNF441Q8N8Z8 693 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 CIDECQ96AQ7 238 aaPredicted RBP16.3■□□□□ 0.2
HDAC11-204ENST00000404040 MARK4Q96L34 752 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 UGT2B28Q9BY64 529 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 OR10A5Q9H207 317 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 C3orf14Q9HBI5 128 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 ZNF639Q9UID6 485 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 SLC6A5Q9Y345 797 aa16.3■□□□□ 0.2
HDAC11-204ENST00000404040 PRSS51A0A1B0GVH4 220 aa16.29■□□□□ 0.2
HDAC11-204ENST00000404040 TP53I11O14683 189 aa16.29■□□□□ 0.2
HDAC11-204ENST00000404040 CFLARO15519 480 aa16.29■□□□□ 0.2
HDAC11-204ENST00000404040 PGRP06401 933 aa16.29■□□□□ 0.2
HDAC11-204ENST00000404040 POLR2JP52435 117 aaKnown RBP16.29■□□□□ 0.2
HDAC11-204ENST00000404040 FBXW4P57775 412 aa16.29■□□□□ 0.2
HDAC11-204ENST00000404040 PSPHP78330 225 aa16.29■□□□□ 0.2
HDAC11-204ENST00000404040 DUSP2Q05923 314 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms