RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 SLC2A3P11169 496 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 HOXB8P17481 243 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 MIPP30301 263 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 CA8P35219 290 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 RDXP35241 583 aaKnown RBP4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 ATP5C1P36542 298 aaKnown RBP4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 TSFMP43897 325 aaKnown RBP4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 SULT1E1P49888 294 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 ADARP55265 1226 aaKnown RBP4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 RWDD2BP57060 319 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 RPP38P78345 283 aaKnown RBP4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 IRX4P78413 519 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 SLC25A11Q02978 314 aaKnown RBP4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 TWF1Q12792 350 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 FAM189A2Q15884 450 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 KBTBD12Q3ZCT8 623 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 FAM106AQ4KMX7 169 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 ARMCX4Q5H9R4 360 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 BRMS1LQ5PSV4 323 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 PPM1LQ5SGD2 360 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 WLSQ5T9L3 541 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 SDHAF4Q5VUM1 108 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 SYPL2Q5VXT5 272 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 C17orf107Q6ZR85 190 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 CHMP1BQ7LBR1 199 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 CCDC91Q7Z6B0 441 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 KATNAL2Q8IYT4 538 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 STKLD1Q8NE28 680 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 C11orf45Q8TAV5 145 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 DQX1Q8TE96 717 aaKnown RBP4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 RNF139Q8WU17 664 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 FAM172AQ8WUF8 416 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 NDRG1Q92597 394 aaKnown RBP4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 SLCO2A1Q92959 643 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 PANX3Q96QZ0 392 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 OPRPNQ99935 248 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 C17orf62Q9BQA9 187 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 HOXD1Q9GZZ0 328 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 NMUR1Q9HB89 426 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 RCOR3Q9P2K3 495 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 SAR1BQ9Y6B6 198 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 NYNRINQ9P2P1 1898 aaKnown RBP4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 IGLV7-46A0A075B6I9 117 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 MEX3AA1L020 520 aaKnown RBP4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 EPOPA6NHQ4 379 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 TMEM110-MUSTN1A8MSY1 372 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 SURF4O15260 269 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 TLX2O43763 284 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 SCO2O43819 266 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 CRCPO75575 148 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 GAS8-AS1O95177 125 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 OAS1P00973 400 aaKnown RBP4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 IGLV3-27P01718 113 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 KDELR1P24390 212 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 GABRR2P28476 465 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 CCR1P32246 355 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 OR3A3P47888 321 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 HCAR3P49019 387 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 SNU13P55769 128 aaKnown RBP4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 IRX1P78414 480 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 PDK2Q15119 407 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 DPYSL2Q16555 572 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 WHAMMP3Q1A5X7 153 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 ZNF497Q6ZNH5 498 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 CYP4V2Q6ZWL3 525 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 ADGRD2Q7Z7M1 963 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 TMEM150AQ86TG1 271 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 TAC4Q86UU9 113 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 KRTAP7-1Q8IUC3 87 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 UNC45BQ8IWX7 931 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 KLHDC8AQ8IYD2 350 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 TEX26Q8N6G2 289 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 OR5T2Q8NGG2 359 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 ACTRT1Q8TDG2 376 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 MAIP1Q8WWC4 291 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 MRPS31Q92665 395 aaKnown RBP4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 KRT35Q92764 455 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 AP2M1Q96CW1 435 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 CDKN2AIPNLQ96HQ2 116 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 RPGRIP1Q96KN7 1286 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 POM121L2Q96KW2 1035 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 KRT12Q99456 494 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 NAP1L3Q99457 506 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 IL12RB2Q99665 862 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 ZNF670Q9BS34 389 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 GOLPH3Q9H4A6 298 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 GPR173Q9NS66 373 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 PIGVQ9NUD9 493 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 DDIT4Q9NX09 232 aa4.18□□□□□ -1.74
HMGB3P19-201ENST00000403971 KIAA1549LQ6ZVL6 1849 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 TRAV19A0A0A6YYK7 116 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 CCDC162PA2VCL2 907 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 G3V2L1 256 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 PGRMC1O00264 195 aaKnown RBP4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 CCL16O15467 120 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 ARHGEF9O43307 516 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 COCHO43405 550 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 RAD51DO75771 328 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 ZNF189O75820 626 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 APOEP02649 317 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms