RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 AK1P00568 194 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 ARAFP10398 606 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 GPR85P60893 370 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 MXRA7P84157 204 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 CDK6Q00534 326 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 MAPK14Q16539 360 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 CYP51A1Q16850 503 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 FLYWCH1Q4VC44 716 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 ZNF766Q5HY98 468 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 RPS26P11Q5JNZ5 115 aaPredicted RBP14.61□□□□□ -0.07
HMGA1-204ENST00000401473 SLC6A19Q695T7 634 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 SLC25A25Q6KCM7 469 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 LRRC74BQ6ZQY2 392 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 IFNEQ86WN2 208 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 PTRH1Q86Y79 214 aaKnown RBP14.61□□□□□ -0.07
HMGA1-204ENST00000401473 ZZZ3Q8IYH5 903 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 RNF148Q8N7C7 305 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 NFKBIDQ8NI38 313 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 TMCO6Q96DC7 493 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 CDRT15Q96T59 188 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 C1orf21Q9H246 121 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 SPAG4Q9NPE6 437 aa14.61□□□□□ -0.07
HMGA1-204ENST00000401473 C15orf38-AP3S2A0A0A6YYH1 394 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 TRAV17A0A0B4J275 112 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 PINLYPA6NC86 204 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 PRORSD1PA6NEY8 169 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 B4DXG7 233 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 DPM1O60762 260 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 GCM2O75603 506 aaPredicted RBP14.6□□□□□ -0.07
HMGA1-204ENST00000401473 UGT2B17O75795 530 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 PGM3O95394 542 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 OXSR1O95747 527 aaPredicted RBP14.6□□□□□ -0.07
HMGA1-204ENST00000401473 SFTPCP11686 197 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 TBXA2RP21731 343 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 LIPEQ05469 1076 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 EFR3AQ14156 821 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 SOWAHCQ53LP3 525 aaPredicted RBP14.6□□□□□ -0.07
HMGA1-204ENST00000401473 ARPINQ7Z6K5 226 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 SULF2Q8IWU5 870 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 POGLUT1Q8NBL1 392 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 SECISBP2Q96T21 854 aaKnown RBP14.6□□□□□ -0.07
HMGA1-204ENST00000401473 TIMMDC1Q9NPL8 285 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 UBQLN4Q9NRR5 601 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 CNIH4Q9P003 139 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 LUZP4Q9P127 313 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 L3MBTL1Q9Y468 752 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 NCKAP5O14513 1909 aa14.6□□□□□ -0.07
HMGA1-204ENST00000401473 ANKRD33BA6NCL7 494 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 NME2P1O60361 137 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 PRB1P04280 392 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 GUSBP08236 651 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 CD46P15529 392 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 ATP6V1C1P21283 382 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 CNR1P21554 472 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 NME2P22392 152 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 EVI2BP34910 448 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 DNASE1L1P49184 302 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 RNF144AP50876 292 aaPredicted RBP14.59□□□□□ -0.07
HMGA1-204ENST00000401473 CRISP3P54108 245 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 ATP12AP54707 1039 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 GAS1P54826 345 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 SCARB2Q14108 478 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 ZNF169Q14929 603 aaPredicted RBP14.59□□□□□ -0.07
HMGA1-204ENST00000401473 KLHL26Q53HC5 615 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 TMEM81Q6P7N7 255 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 MARCH3Q86UD3 253 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 HPS6Q86YV9 775 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 Q8NA96 180 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 LSM14AQ8ND56 463 aaKnown RBP14.59□□□□□ -0.07
HMGA1-204ENST00000401473 ANGPTL4Q9BY76 406 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 MTHFD2LQ9H903 347 aaPredicted RBP14.59□□□□□ -0.07
HMGA1-204ENST00000401473 SACM1LQ9NTJ5 587 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 ADA2Q9NZK5 511 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 PCDHGB6Q9Y5F9 930 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 HRH3Q9Y5N1 445 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 KIAA0513O60268 411 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 P04436 131 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 MSX2P35548 267 aaPredicted RBP14.59□□□□□ -0.07
HMGA1-204ENST00000401473 DCTP40126 519 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 GSK3BP49841 420 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 VMACQ2NL98 169 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 FNDC7Q5VTL7 733 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 REEP3Q6NUK4 255 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 C16orf89Q6UX73 402 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 ZNF619Q8N2I2 560 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 FBXW8Q8N3Y1 598 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 C11orf65Q8NCR3 313 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 REXO5Q96IC2 774 aaKnown RBP14.59□□□□□ -0.07
HMGA1-204ENST00000401473 ALG2Q9H553 416 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 METTL7AQ9H8H3 244 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 BCL2L10Q9HD36 194 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 CD300AQ9UGN4 299 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 PCDHGA10Q9Y5H3 936 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 DSPPQ9NZW4 1301 aa14.59□□□□□ -0.07
HMGA1-204ENST00000401473 ZNF462Q96JM2 2506 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 CLDN24A6NM45 220 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 ALG1L2C9J202 215 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 HS6ST1O60243 411 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 NGFRP08138 427 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 AQP1P29972 269 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms