RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 ATP6V1C1P21283 382 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 CALB2P22676 271 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 EIF1P41567 113 aaKnown RBP6.88□□□□□ -1.31
USP16-204ENST00000399976 CLK1P49759 484 aaKnown RBP6.88□□□□□ -1.31
USP16-204ENST00000399976 MEOX1P50221 254 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 DSCR4P56555 118 aaPredicted RBP6.88□□□□□ -1.31
USP16-204ENST00000399976 FOXK1P85037 733 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 LASP1Q14847 261 aaKnown RBP6.88□□□□□ -1.31
USP16-204ENST00000399976 GRAMD1BQ3KR37 738 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 LIN52Q52LA3 116 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 MTX3Q5HYI7 312 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 GCNT6Q5T4J0 391 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 SLC2A7Q6PXP3 512 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 PATL1Q86TB9 770 aaKnown RBP6.88□□□□□ -1.31
USP16-204ENST00000399976 PLCZ1Q86YW0 608 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 SULF2Q8IWU5 870 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 PGAM4Q8N0Y7 254 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 GPR151Q8TDV0 419 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 ST8SIA1Q92185 356 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 CDS1Q92903 461 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 GAL3ST4Q96RP7 486 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 SLC38A1Q9H2H9 487 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 PIF1Q9H611 641 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 PRPF19Q9UMS4 504 aaKnown RBP6.88□□□□□ -1.31
USP16-204ENST00000399976 IGF2RP11717 2491 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 ACACBO00763 2458 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 A8MUI8 341 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 DCTP40126 519 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 NFYCQ13952 458 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 GK3PQ14409 553 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 MAPK11Q15759 364 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 C1QTNF12Q5T7M4 302 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 ZNF468Q5VIY5 522 aaPredicted RBP6.88□□□□□ -1.31
USP16-204ENST00000399976 REEP3Q6NUK4 255 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 MTFR2Q6P444 385 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 C5orf46Q6UWT4 87 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 C6orf89Q6UWU4 347 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 LINC00696Q6ZRV3 163 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 ZNF621Q6ZSS3 439 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 PTRH1Q86Y79 214 aaKnown RBP6.88□□□□□ -1.31
USP16-204ENST00000399976 GHDCQ8N2G8 530 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 C11orf65Q8NCR3 313 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 OR6S1Q8NH40 331 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 RELTQ969Z4 430 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 TTTY12Q9BZ98 90 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.88□□□□□ -1.31
USP16-204ENST00000399976 OLAHQ9NV23 265 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 VAPAQ9P0L0 249 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 ANGPT4Q9Y264 503 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 AP4B1Q9Y6B7 739 aa6.88□□□□□ -1.31
USP16-204ENST00000399976 K7EM74 188 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 SCDO00767 359 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 DNPH1O43598 174 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 CPSF4O95639 269 aaKnown RBP6.87□□□□□ -1.31
USP16-204ENST00000399976 IGKV1D-16P01601 117 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 CCL3P10147 92 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 NID1P14543 1247 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 AGAP20933 346 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 GCKP35557 465 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 SOAT1P35610 550 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 HTR3AP46098 478 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 HPCAP84074 193 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 EIF2S3LQ2VIR3 472 aaKnown RBP6.87□□□□□ -1.31
USP16-204ENST00000399976 C16orf89Q6UX73 402 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 C16orf62Q7Z3J2 963 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 MTDHQ86UE4 582 aaKnown RBP6.87□□□□□ -1.31
USP16-204ENST00000399976 RNF130Q86XS8 419 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 OR2M3Q8NG83 312 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 OR10G3Q8NGC4 313 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 GRHL3Q8TE85 626 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 VPS33AQ96AX1 596 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 NODALQ96S42 347 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 PINK1Q9BXM7 581 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 ZBTB20Q9HC78 741 aaPredicted RBP6.87□□□□□ -1.31
USP16-204ENST00000399976 PAQR5Q9NXK6 330 aaPredicted RBP6.87□□□□□ -1.31
USP16-204ENST00000399976 TMEM181Q9P2C4 612 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 SNX8Q9Y5X2 465 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 SHANK1Q9Y566 2161 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 PHF3Q92576 2039 aaKnown RBP6.87□□□□□ -1.31
USP16-204ENST00000399976 ITPR1Q14643 2758 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 A6NL46 340 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 FAM47E-STBD1D6RA91 191 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 HCRTR2O43614 444 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 ICOSLGO75144 302 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 REM1O75628 298 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 IFNA14P01570 189 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 CPN1P15169 458 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 HTR1EP28566 365 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 PGM1P36871 562 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 P2RX1P51575 399 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 FBXW4P57775 412 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 RBPJQ06330 500 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 ADRM1Q16186 407 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 IL20RBQ6UXL0 311 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 MAMDC2Q7Z304 686 aaPredicted RBP6.87□□□□□ -1.31
USP16-204ENST00000399976 SNX32Q86XE0 403 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 KRT73Q86Y46 540 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 PEX5LQ8IYB4 626 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 PM20D2Q8IYS1 436 aa6.87□□□□□ -1.31
USP16-204ENST00000399976 OR1J4Q8NGS1 313 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms