RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 OR7G3Q8NG95 312 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 OR5H2Q8NGV7 314 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 ZNF300Q96RE9 604 aaPredicted RBP20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 CNIH4Q9P003 139 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 ANKMY1Q9P2S6 941 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 ITGAMP11215 1152 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 NOVP48745 357 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 PLAG1Q6DJT9 500 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 OR5AR1Q8NGP9 310 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 RIMS3Q9UJD0 308 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 PIGBOS1A0A0B4J2F0 54 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 OTOL1A6NHN0 477 aaPredicted RBP20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 MPPED1O15442 326 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 CNOT4O95628 575 aaKnown RBP20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 CERS1P27544 350 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 RSU1Q15404 277 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 MTFR2Q6P444 385 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 PGM2L1Q6PCE3 622 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 RCBTB1Q8NDN9 531 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 CHPT1Q8WUD6 406 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 ACTR10Q9NZ32 417 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 IL17CQ9P0M4 197 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 RNF215Q9Y6U7 377 aa20.22■□□□□ 0.83
ANKRD28-201ENST00000399451 NDUFB2O95178 105 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 SDC1P18827 310 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 EMP2P54851 167 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 ACVR1CQ8NER5 493 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 ZNF649Q9BS31 505 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 GORASP2Q9H8Y8 452 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 A6NHS1 94 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 WASH4PA8MWX3 477 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 DNAJB6O75190 326 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 APLNRP35414 380 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 NR4A2P43354 598 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 TMEM201Q5SNT2 666 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 KIF18BQ86Y91 864 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 TFAP2CQ92754 450 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 SLA2Q9H6Q3 261 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 UBE2J1Q9Y385 318 aaPredicted RBP20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 MEIS3P2A8K0S8 358 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 TBC1D15Q8TC07 691 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 ZNF597Q96LX8 424 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 REV1Q9UBZ9 1251 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 ZNF888P0CJ79 500 aaPredicted RBP20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 CDK2P24941 298 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 SOX3P41225 446 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 PIN1Q13526 163 aaPredicted RBP20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 TCEAL8Q8IYN2 117 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 OR9A2Q8NGT5 310 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 TREX1Q9NSU2 369 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 EMCNQ9ULC0 261 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 ACTL6BO94805 426 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 SHISA6Q6ZSJ9 500 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 TRIM46Q7Z4K8 759 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 OR9K2Q8NGE7 335 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 PBDC1Q9BVG4 233 aa20.21■□□□□ 0.83
ANKRD28-201ENST00000399451 H3BML4 177 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 SNRPD2P62316 118 aaKnown RBP20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 PPA1Q15181 289 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 CNIH2Q6PI25 160 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 CFAP77Q6ZQR2 320 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 OR5B2Q96R09 309 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 CDC6Q99741 560 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 A0A0J9YY10 115 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 GCH1P30793 250 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 PBX2P40425 430 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 ZNF140P52738 457 aaPredicted RBP20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 ALOXE3Q9BYJ1 711 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 ZNF175Q9Y473 711 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 NUBP2Q9Y5Y2 271 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 LOC102723532A0A0G2JNH3 316 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 SERTAD2Q14140 314 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 DCP2Q8IU60 420 aaKnown RBP20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 RBM12BQ8IXT5 1001 aaKnown RBP20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 ARFGAP1Q8N6T3 406 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 SYT11Q9BT88 431 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 STARD5Q9NSY2 213 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 VAPAQ9P0L0 249 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 NENFQ9UMX5 172 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 KDM3BQ7LBC6 1761 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 ARNTLO00327 626 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 CASC3O15234 703 aaKnown RBP20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 ZNF767PQ75MW2 155 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 CPOQ8IVL8 374 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 SPARTQ8N0X7 666 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 LMF1Q96S06 567 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 RBM24Q9BX46 236 aaKnown RBP20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 A0A0A6YYH2 397 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 A6NJ64 397 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 CD6P30203 668 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 MC3RP41968 323 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 RAB5BP61020 215 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 ZNF616Q08AN1 781 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 PCGF3Q3KNV8 242 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 IGFN1Q86VF2 1251 aa20.2■□□□□ 0.82
ANKRD28-201ENST00000399451 TRAV18A0A075B6X5 111 aa20.19■□□□□ 0.82
ANKRD28-201ENST00000399451 A0A0G2JMP0 313 aa20.19■□□□□ 0.82
ANKRD28-201ENST00000399451 HMX3A6NHT5 357 aa20.19■□□□□ 0.82
ANKRD28-201ENST00000399451 KIAA0355O15063 1070 aa20.19■□□□□ 0.82
ANKRD28-201ENST00000399451 SC5DO75845 299 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms