RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 OR5K3A6NET4 321 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 PRR23D1E9PI22 279 aaPredicted RBP9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 GPR171O14626 319 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 LCE2BO14633 110 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 ATXN7O15265 892 aaPredicted RBP9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 KDM4BO94953 1096 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 PRR23D2P0DMB1 279 aaPredicted RBP9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 ACP5P13686 325 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 CTRB1P17538 263 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 TRIM23P36406 574 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 PUDPQ08623 228 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 GPR139Q6DWJ6 353 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 CTRB2Q6GPI1 263 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 FAAP20Q6NZ36 180 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 TRILQ7L0X0 811 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 CEACAM19Q7Z692 300 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 SERPINA12Q8IW75 414 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 FBXO15Q8NCQ5 510 aaPredicted RBP9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 ORAI1Q96D31 301 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 WDR89Q96FK6 387 aaPredicted RBP9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 TMEM169Q96HH4 297 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 SOSTQ9BQB4 213 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 GHITMQ9H3K2 345 aa9.26□□□□□ -0.93
PTCHD4-202ENST00000398738 PLXNA4Q9HCM2 1894 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 RPS10-NUDT3A0A1W2PQS6 291 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 H2AFB2P0C5Z0 115 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 ACSM4P0C7M7 580 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 C1GALT1C1LP0DN25 315 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 PAICSP22234 425 aaKnown RBP9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 AHCYP23526 432 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 AKR1D1P51857 326 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 SFRP5Q5T4F7 317 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 PLBD1Q6P4A8 553 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 FAM122CQ6P4D5 195 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 CBARPQ8N350 705 aaPredicted RBP9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 OR4D9Q8NGE8 314 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 ELMOD3Q96FG2 381 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 CXorf58Q96LI9 332 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 SORCS2Q96PQ0 1159 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 AIFM2Q9BRQ8 373 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 MED18Q9BUE0 208 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 EXOSC1Q9Y3B2 195 aaKnown RBP9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 C5orf42Q9H799 3197 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 MYO7AQ13402 2215 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 A0A1W2PRG6 482 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 TMEM129A0AVI4 362 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 SLC9B1P1A6NJY1 282 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 E9PI62 339 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 NPIPB8E9PQR5 432 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 SGK494L7N484 410 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 MID1O15344 667 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 UGDHO60701 494 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 FZD7O75084 574 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 KLHL18O94889 574 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 ANKRD34CP0C6C1 535 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 PTHLHP12272 177 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 LCN1P31025 176 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 BLVRAP53004 296 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 ZNF155Q12901 538 aaPredicted RBP9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 SP140Q13342 867 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 SNTB2Q13425 540 aaKnown RBP9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 CAMK2DQ13557 499 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 SPOUT1Q5T280 376 aaKnown RBP9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 TMEM107Q6UX40 140 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 CAMKMTQ7Z624 323 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 AMER3Q8N944 861 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 GOT1L1Q8NHS2 421 aaPredicted RBP9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 TMEM175Q9BSA9 504 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 CWH43Q9H720 699 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 ELAC1Q9H777 363 aaKnown RBP9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 LIN7BQ9HAP6 207 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 CACNA1CQ13936 2221 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 NLRC5Q86WI3 1866 aa9.25□□□□□ -0.93
PTCHD4-202ENST00000398738 J3QLW9 94 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 PGRMC2O15173 223 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 SOCS5O75159 536 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 HLA-DQB1P01920 261 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 PF4P02776 101 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 ZNF19P17023 458 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 NAGAP17050 411 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 HSD3B2P26439 372 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 FGF9P31371 208 aaPredicted RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 BTCP35070 178 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 GAS1P54826 345 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 SMIM11AP58511 58 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 TNP2Q05952 138 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 SLC25A25Q6KCM7 469 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 DNAJB7Q7Z6W7 309 aaPredicted RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 KRT78Q8N1N4 520 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 SIRT6Q8N6T7 355 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 BOLLQ8N9W6 283 aaKnown RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 OR6M1Q8NGM8 313 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 OR5M3Q8NGP4 307 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 MOSPD2Q8NHP6 518 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 ZNF296Q8WUU4 475 aaPredicted RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 SMPDL3AQ92484 453 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 SFXN2Q96NB2 322 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 AUNIPQ9H7T9 357 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 TEX10Q9NXF1 929 aaPredicted RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 AGAP14A8MT82 685 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms