RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 DEFB110Q30KQ9 67 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 TANGO2Q6ICL3 276 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 PLET1Q6UQ28 207 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF765Q7L2R6 523 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 CAMKMTQ7Z624 323 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 DEFB119Q8N690 84 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 SRFBP1Q8NEF9 429 aaKnown RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 OR52I1Q8NGK6 324 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 OR51A7Q8NH64 312 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 DNAJA3Q96EY1 480 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 AMDHD1Q96NU7 426 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 SUCNR1Q9BXA5 334 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 LGR4Q9BXB1 951 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 HHATLQ9HCP6 504 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 SLC35C2Q9NQQ7 365 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 GRIP1Q9Y3R0 1128 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 PRR14LQ5THK1 2151 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 HRO43593 1189 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 FCMRO60667 390 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 CHRM4P08173 479 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 HOXB3P14651 431 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 ATP5A1P25705 553 aaKnown RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 TALDO1P37837 337 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 MAP2K3P46734 347 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 DUSP2Q05923 314 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 DEFB134Q4QY38 66 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 GARNL3Q5VVW2 1013 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 SYT14Q8NB59 555 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 OR6T1Q8NGN1 323 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 TMEM255BQ8WV15 326 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 ZFP3Q96NJ6 502 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 CCDC32Q9BV29 185 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 CHST8Q9H2A9 424 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 OR52A5Q9H2C5 316 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 TMEM38AQ9H6F2 299 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 QPCTLQ9NXS2 382 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 THAP10Q9P2Z0 257 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 FAM183AA6NL82 134 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 CHST10O43529 356 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 HMGN1P05114 100 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 TFPIP10646 304 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 EDNRAP25101 427 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 ITGB7P26010 798 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 ITPKBP27987 946 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 GRPRP30550 384 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 EPHA5P54756 1037 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 AMIGO1Q86WK6 493 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 METTL27Q8N6F8 245 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 TMEM99Q8N816 258 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 ASCC1Q8N9N2 400 aaKnown RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 OR4F15Q8NGB8 312 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 RAB11FIP5Q9BXF6 653 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 C11orf54Q9H0W9 315 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 MED20Q9H944 212 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 POLMQ9NP87 494 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 GPR34Q9UPC5 381 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 GPR55Q9Y2T6 319 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 WDR45Q9Y484 360 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 PCDHGB2Q9Y5G2 931 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 OR6C74A6NCV1 312 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 PGRMC2O15173 223 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 OR10H2O60403 315 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 OR5F1O95221 314 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 PTTG1O95997 202 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 ASGR2P07307 311 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 HOXB9P17482 250 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 OPRD1P41143 372 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 ARRB1P49407 418 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 CCR4P51679 360 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 PDX1P52945 283 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 RHOBP62745 196 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 PUDPQ08623 228 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 ENTPD8Q5MY95 495 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 FIGLAQ6QHK4 219 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 IZUMO1Q8IYV9 350 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 LRRC17Q8N6Y2 441 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 SLC37A3Q8NCC5 494 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 PSD2Q9BQI7 771 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 RSPH9Q9H1X1 276 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 C6orf106Q9H6K1 298 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 MUTYHQ9UIF7 546 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 OR10H1Q9Y4A9 318 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 KLK4Q9Y5K2 254 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 CASP8AP2Q9UKL3 1982 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 A0A075B6Q4 140 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 A0A1B0GVT2 93 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 A0A1W2PQL4 384 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 IL1AP01583 271 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 SLC35G6P0C7Q6 338 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 ACVR1BP36896 505 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 CD79BP40259 229 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 ETV1P50549 477 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 OCLNQ16625 522 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 SLC27A4Q6P1M0 643 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 ZER1Q7Z7L7 766 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF761Q86XN6 746 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 ACOT4Q8N9L9 421 aa4.63□□□□□ -1.67
SMAD4-202ENST00000398417 MAFAQ8NHW3 353 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 SMAP2Q8WU79 429 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-202ENST00000398417 PDXPQ96GD0 296 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms