RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 DENND6BQ8NEG7 585 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 SPRYD4Q8WW59 207 aaPredicted RBP2.1□□□□□ -2.07
CD47-203ENST00000398258 OSTF1Q92882 214 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 TRIM44Q96DX7 344 aaPredicted RBP2.1□□□□□ -2.07
CD47-203ENST00000398258 HPDLQ96IR7 371 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 ELMO2Q96JJ3 720 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 RANBP9Q96S59 729 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 TMEM121Q9BTD3 319 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 RMND5AQ9H871 391 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 FARSBQ9NSD9 589 aaKnown RBP2.1□□□□□ -2.07
CD47-203ENST00000398258 C1orf123Q9NWV4 160 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 ELOVL2Q9NXB9 296 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 RDH8Q9NYR8 311 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 DHRS4-AS1Q9P1J3 65 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 CGNQ9P2M7 1197 aaKnown RBP2.1□□□□□ -2.07
CD47-203ENST00000398258 EXTL2Q9UBQ6 330 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 SMC3Q9UQE7 1217 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 GSTK1Q9Y2Q3 226 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 DDX49Q9Y6V7 483 aaKnown RBP2.1□□□□□ -2.07
CD47-203ENST00000398258 SPACA6W5XKT8 324 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 USP6P35125 1406 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 POGZQ7Z3K3 1410 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 GON4LQ3T8J9 2241 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 HCFC1P51610 2035 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 GSAPA4D1B5 854 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 TRABD2BA6NFA1 517 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 PPIAL4DF5H284 164 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 GPRIN2O60269 458 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 LCMT2O60294 686 aaKnown RBP2.09□□□□□ -2.07
CD47-203ENST00000398258 ZNF354AO60765 605 aaPredicted RBP2.09□□□□□ -2.07
CD47-203ENST00000398258 B3GAT3O94766 335 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 PRAMEF12O95522 483 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 ANP32DO95626 131 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 HPP00738 406 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 PIGRP01833 764 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 CSF2P04141 144 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 IGF1P05019 195 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 PCCBP05166 539 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 IGFBP1P08833 259 aaPredicted RBP2.09□□□□□ -2.07
CD47-203ENST00000398258 IQCF3P0C7M6 154 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 ANXA3P12429 323 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 CPN1P15169 458 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 SDC1P18827 310 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 CDH5P33151 784 aaPredicted RBP2.09□□□□□ -2.07
CD47-203ENST00000398258 PPT1P50897 306 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 ARHGDIBP52566 201 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 HMGCS2P54868 508 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 OSTNP61366 133 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 RND3P61587 244 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 CNTN2Q02246 1040 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 PAX2Q02962 417 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 SNTB2Q13425 540 aaKnown RBP2.09□□□□□ -2.07
CD47-203ENST00000398258 Q1RN00 199 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 C15orf32Q32M92 178 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 CNPY1Q3B7I2 92 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 CELF3Q5SZQ8 465 aaKnown RBP2.09□□□□□ -2.07
CD47-203ENST00000398258 SPATA46Q5T0L3 261 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 OLFML2AQ68BL7 652 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 SPINK14Q6IE38 97 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 CYS1Q717R9 158 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 SERINC5Q86VE9 423 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 BPIFB2Q8N4F0 458 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 IPMKQ8NFU5 416 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 OR2L2Q8NH16 312 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 RFESDQ8TAC1 157 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 RAET1EQ8TD07 263 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 C18orf25Q96B23 403 aaPredicted RBP2.09□□□□□ -2.07
CD47-203ENST00000398258 ZBED6CLQ96FA7 236 aaPredicted RBP2.09□□□□□ -2.07
CD47-203ENST00000398258 VPS39Q96JC1 886 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 AKR1E2Q96JD6 320 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 TXN2Q99757 166 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 CRACR2AQ9BSW2 395 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 TM2D1Q9BX74 207 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 PUS3Q9BZE2 481 aaKnown RBP2.09□□□□□ -2.07
CD47-203ENST00000398258 NT5C3AQ9H0P0 336 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 DHX33Q9H6R0 707 aaKnown RBP2.09□□□□□ -2.07
CD47-203ENST00000398258 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.09□□□□□ -2.07
CD47-203ENST00000398258 MRPL39Q9NYK5 338 aaKnown RBP2.09□□□□□ -2.07
CD47-203ENST00000398258 ARMCX1Q9P291 453 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 ANAPC7Q9UJX3 599 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 TMCC3Q9ULS5 477 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 MRPS7Q9Y2R9 242 aaKnown RBP2.09□□□□□ -2.07
CD47-203ENST00000398258 USP16Q9Y5T5 823 aa2.09□□□□□ -2.07
CD47-203ENST00000398258 TRAV9-2A0A087WT02 112 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 IGHV3-35A0A0C4DH35 117 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 A0A1W2PQ72 361 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 MBLAC1A4D2B0 266 aaPredicted RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 ZSCAN5BA6NJL1 495 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 E9PAM4 449 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 K7ENP7 123 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 SAP18O00422 153 aaKnown RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 CDX4O14627 284 aaPredicted RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 XPO1O14980 1071 aaKnown RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 PHF1O43189 567 aaPredicted RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 ZSCAN12O43309 604 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 LATO43561 262 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 TSC22D2O75157 780 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 STX11O75558 287 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 SLC2A10O95528 541 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 MBD3O95983 291 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms