RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 ACADMP11310 421 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 KELP23276 732 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 NUDT1P36639 197 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 CCR6P51684 374 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 HCCSP53701 268 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 EFNB1P98172 346 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 MINDY4Q4G0A6 757 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 TIGD3Q6B0B8 471 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 TEX261Q6UWH6 196 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 CYB561A3Q8NBI2 242 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 DNAJA4Q8WW22 397 aaPredicted RBP12.86□□□□□ -0.35
COL6A2-203ENST00000397763 SMG7Q92540 1137 aaKnown RBP12.86□□□□□ -0.35
COL6A2-203ENST00000397763 UBE2E3Q969T4 207 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 PRRC1Q96M27 445 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 POLMQ9NP87 494 aaPredicted RBP12.86□□□□□ -0.35
COL6A2-203ENST00000397763 H2AFY2Q9P0M6 372 aaPredicted RBP12.86□□□□□ -0.35
COL6A2-203ENST00000397763 FBXL4Q9UKA2 621 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 U3KQ87 197 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 TMEM129A0AVI4 362 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 OR52A4PA6NMU1 304 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 PROM1O43490 865 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 FGBP02675 491 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 GKN3PP0CG01 181 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 DRD5P21918 477 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 CERS1P27544 350 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 E2F1Q01094 437 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 ID2Q02363 134 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 SUZ12Q15022 739 aaKnown RBP12.86□□□□□ -0.35
COL6A2-203ENST00000397763 AGERQ15109 404 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 SLC25A35Q3KQZ1 300 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 AMZ2Q86W34 360 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 ZNF655Q8N720 491 aaPredicted RBP12.86□□□□□ -0.35
COL6A2-203ENST00000397763 ARIH2OSQ8N7S6 290 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 RGMAQ96B86 450 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 THAP7Q9BT49 309 aaPredicted RBP12.86□□□□□ -0.35
COL6A2-203ENST00000397763 TNFRSF10DQ9UBN6 386 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 EIF3KQ9UBQ5 218 aaKnown RBP12.86□□□□□ -0.35
COL6A2-203ENST00000397763 RABL2BQ9UNT1 228 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 KCNK6Q9Y257 313 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 CDH10Q9Y6N8 788 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 MTCL1Q9Y4B5 1905 aaKnown RBP12.86□□□□□ -0.35
COL6A2-203ENST00000397763 A0A1W2PR48 441 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 FGF18O76093 207 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 THY1P04216 161 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 HLA-DPB1P04440 258 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 TM4SF4P48230 202 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 CCR8P51685 355 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 RGS8P57771 180 aaPredicted RBP12.86□□□□□ -0.35
COL6A2-203ENST00000397763 RGS1Q08116 209 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 COX10Q12887 443 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 FNDC3BQ53EP0 1204 aaKnown RBP12.86□□□□□ -0.35
COL6A2-203ENST00000397763 EOGTQ5NDL2 527 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 FAM46CQ5VWP2 391 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 PLPP4Q5VZY2 271 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 FAM92BQ6ZTR7 304 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 COQ10AQ96MF6 247 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 FERD3LQ96RJ6 166 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 ABHD1Q96SE0 405 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 ORAI3Q9BRQ5 295 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 DPH1Q9BZG8 443 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 DIABLOQ9NR28 239 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 TRDV1A0A1B0GX56 115 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 STK25O00506 426 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 SHOXO15266 292 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 CHP2O43745 196 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 PAPLNO95428 1278 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 M6PRP20645 277 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 VIPR2P41587 438 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 VSX2P58304 361 aaPredicted RBP12.85□□□□□ -0.35
COL6A2-203ENST00000397763 ST8SIA6P61647 398 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 ENTPD8Q5MY95 495 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 OR4C11Q6IEV9 310 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 PRSS45Q7RTY3 260 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 ADGRD2Q7Z7M1 963 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 KLHL36Q8N4N3 616 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 OR51L1Q8NGJ5 315 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 HMGB4Q8WW32 186 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 MARVELD1Q9BSK0 173 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 SPATA2Q9UM82 520 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 PPIEQ9UNP9 301 aaKnown RBP12.85□□□□□ -0.35
COL6A2-203ENST00000397763 OBSL1O75147 1896 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 KIF26AQ9ULI4 1882 aaPredicted RBP12.85□□□□□ -0.35
COL6A2-203ENST00000397763 CHD9Q3L8U1 2897 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 ATP6V1G2-DDX39BF2Z307 99 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 ZIC2O95409 532 aaPredicted RBP12.85□□□□□ -0.35
COL6A2-203ENST00000397763 GCGRP47871 477 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 TAS2R38P59533 333 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 ZMYND11Q15326 602 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 BHLHB9Q6PI77 547 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 KLHDC8AQ8IYD2 350 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 C1QTNF7Q9BXJ2 289 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 ZCCHC2Q9C0B9 1178 aaKnown RBP12.85□□□□□ -0.35
COL6A2-203ENST00000397763 CLEC4MQ9H2X3 399 aaPredicted RBP12.85□□□□□ -0.35
COL6A2-203ENST00000397763 FGF20Q9NP95 211 aaPredicted RBP12.85□□□□□ -0.35
COL6A2-203ENST00000397763 LIPT1Q9Y234 373 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 TRPM6Q9BX84 2022 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 MYO9BQ13459 2157 aa12.85□□□□□ -0.35
COL6A2-203ENST00000397763 CACNA1IQ9P0X4 2223 aa12.84□□□□□ -0.35
COL6A2-203ENST00000397763 IGKV1-8A0A0C4DH67 115 aa12.84□□□□□ -0.35
COL6A2-203ENST00000397763 H3BUI4 141 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms