RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 GFAPP14136 432 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 SLC6A8P48029 635 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 TRA2BP62995 288 aaKnown RBP8.38□□□□□ -1.07
NEDD9-203ENST00000397378 IRX1P78414 480 aaPredicted RBP8.38□□□□□ -1.07
NEDD9-203ENST00000397378 DR1Q01658 176 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 GGTLC2Q14390 218 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 ERCC6LQ2NKX8 1250 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 CTU2Q2VPK5 515 aaKnown RBP8.38□□□□□ -1.07
NEDD9-203ENST00000397378 COMMD6Q7Z4G1 85 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 CCDC91Q7Z6B0 441 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 DTX2Q86UW9 622 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 CENPLQ8N0S6 344 aaPredicted RBP8.38□□□□□ -1.07
NEDD9-203ENST00000397378 SEMA6DQ8NFY4 1073 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 OR52B6Q8NGF0 335 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 OR5M1Q8NGP8 315 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 UHMK1Q8TAS1 419 aaKnown RBP8.38□□□□□ -1.07
NEDD9-203ENST00000397378 PYROXD1Q8WU10 500 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 PROX1Q92786 737 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 KAT2AQ92830 837 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 S100PBPQ96BU1 408 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 EFHD2Q96C19 240 aaPredicted RBP8.38□□□□□ -1.07
NEDD9-203ENST00000397378 FAIM2Q9BWQ8 316 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 CACNG6Q9BXT2 260 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 PRRG4Q9BZD6 226 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 ANKRA2Q9H9E1 313 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 FOLH1BQ9HBA9 442 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 CLEC4AQ9UMR7 237 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 SNX12Q9UMY4 172 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 ARFGEF3Q5TH69 2177 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 NBEAL2Q6ZNJ1 2754 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 IGLV3-32A0A0A0MS00 114 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 OR7A17O14581 309 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 PLOD3O60568 738 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 GCM2O75603 506 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-203ENST00000397378 CTAGE8P0CG41 777 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 ADH6P28332 368 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 EIF1AXP47813 144 aaKnown RBP8.37□□□□□ -1.07
NEDD9-203ENST00000397378 CCNG1P51959 295 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 PSG6Q00889 435 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 GALNT1Q10472 559 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-203ENST00000397378 IFT88Q13099 833 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 ACAP2Q15057 778 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 RAB35Q15286 201 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 FAM83EQ2M2I3 478 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 GGTA1PQ4G0N0 100 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 TTC19Q6DKK2 380 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-203ENST00000397378 FAM180BQ6P0A1 224 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 GAS2L3Q86XJ1 694 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 SLC44A2Q8IWA5 706 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-203ENST00000397378 CTAGE4Q8IX94 777 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 SAMD14Q8IZD0 417 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-203ENST00000397378 GABRG1Q8N1C3 465 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 OR4N2Q8NGD1 307 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 C10orf105Q8TEF2 133 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 HSD17B8Q92506 261 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 ADGRG7Q96K78 797 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 CDK15Q96Q40 435 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 USB1Q9BQ65 265 aaKnown RBP8.37□□□□□ -1.07
NEDD9-203ENST00000397378 RTN4RQ9BZR6 473 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 TRIM2Q9C040 744 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 NOL11Q9H8H0 719 aaKnown RBP8.37□□□□□ -1.07
NEDD9-203ENST00000397378 FAM120CQ9NX05 1096 aaKnown RBP8.37□□□□□ -1.07
NEDD9-203ENST00000397378 TAS2R9Q9NYW1 312 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 UTS2RQ9UKP6 389 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 MCTS1Q9ULC4 181 aaKnown RBP8.37□□□□□ -1.07
NEDD9-203ENST00000397378 OR10H1Q9Y4A9 318 aa8.37□□□□□ -1.07
NEDD9-203ENST00000397378 PRKDCP78527 4128 aaKnown RBP8.37□□□□□ -1.07
NEDD9-203ENST00000397378 A0A0A6YYJ9 748 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 SLCO1B7G3V0H7 640 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 EIF1AYO14602 144 aaKnown RBP8.36□□□□□ -1.07
NEDD9-203ENST00000397378 ADAMDEC1O15204 470 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 EIF3HO15372 352 aaKnown RBP eCLIP8.36□□□□□ -1.07
NEDD9-203ENST00000397378 NME6O75414 186 aaPredicted RBP8.36□□□□□ -1.07
NEDD9-203ENST00000397378 TUBBP07437 444 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 GSTA2P09210 222 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 ZNF17P17021 662 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 AGTR1P30556 359 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 ARL1P40616 181 aaPredicted RBP8.36□□□□□ -1.07
NEDD9-203ENST00000397378 ALDH9A1P49189 494 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 TRAF3Q13114 568 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 STX5Q13190 355 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 TAB1Q15750 504 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 CYP27C1Q4G0S4 372 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 SFRP5Q5T4F7 317 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 AGAP6Q5VW22 663 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 GTF2IRD2BQ6EKJ0 949 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 PPP4R4Q6NUP7 873 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 FIGNL1Q6PIW4 674 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 SEZ6L2Q6UXD5 910 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 C3orf62Q6ZUJ4 267 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 GTF2IRD2Q86UP8 949 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 WDR75Q8IWA0 830 aaKnown RBP8.36□□□□□ -1.07
NEDD9-203ENST00000397378 LRRC8AQ8IWT6 810 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 CTAGE3PQ8IX95 158 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 CCDC116Q8IYX3 515 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 SLC35F6Q8N357 371 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 OR9A2Q8NGT5 310 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 OR10D3Q8NH80 312 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 PIWIL2Q8TC59 973 aaKnown RBP8.36□□□□□ -1.07
NEDD9-203ENST00000397378 DUSP19Q8WTR2 217 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms