RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 EQTNQ9NQ60 294 aa22.47■■□□□ 1.19
CSNK1E-203ENST00000396832 NTNG1Q9Y2I2 539 aa22.47■■□□□ 1.19
CSNK1E-203ENST00000396832 DENND4CQ5VZ89 1909 aa22.47■■□□□ 1.19
CSNK1E-203ENST00000396832 CHST10O43529 356 aa22.47■■□□□ 1.19
CSNK1E-203ENST00000396832 RNASE12Q5GAN4 147 aaKnown RBP22.47■■□□□ 1.19
CSNK1E-203ENST00000396832 ENTPD8Q5MY95 495 aa22.47■■□□□ 1.19
CSNK1E-203ENST00000396832 PARS2Q7L3T8 475 aaKnown RBP22.47■■□□□ 1.19
CSNK1E-203ENST00000396832 FTMTQ8N4E7 242 aa22.47■■□□□ 1.19
CSNK1E-203ENST00000396832 FBXO15Q8NCQ5 510 aaPredicted RBP22.47■■□□□ 1.19
CSNK1E-203ENST00000396832 TIFAQ96CG3 184 aa22.47■■□□□ 1.19
CSNK1E-203ENST00000396832 ZNF607Q96SK3 696 aa22.47■■□□□ 1.19
CSNK1E-203ENST00000396832 HCFC2Q9Y5Z7 792 aa22.47■■□□□ 1.19
CSNK1E-203ENST00000396832 A0A1W2PS29 197 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 PCP4L1A6NKN8 68 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 ZNF687Q8N1G0 1237 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 BBS1Q8NFJ9 593 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 OR2T4Q8NH00 348 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 GIMAP1Q8WWP7 306 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 FAM46AQ96IP4 442 aaKnown RBP22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 BEX1Q9HBH7 125 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 ZCCHC3Q9NUD5 404 aaKnown RBP22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 HCN3Q9P1Z3 774 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 WNT6Q9Y6F9 365 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 CPSF4LA6NMK7 179 aaKnown RBP22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 KDM4EB2RXH2 506 aaPredicted RBP22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 ERAL1O75616 437 aaKnown RBP22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 EPPINO95925 133 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 C8orf89P0DMQ9 161 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 MMP12P39900 470 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 CFAP77Q6ZQR2 320 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 TOMM5Q8N4H5 51 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 POGLUT1Q8NBL1 392 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 LSM14AQ8ND56 463 aaKnown RBP22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 ADAMTS14Q8WXS8 1223 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 ERMAPQ96PL5 475 aaPredicted RBP22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 TBX5Q99593 518 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 SDHAF2Q9NX18 166 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 TMEM5Q9Y2B1 443 aa22.46■■□□□ 1.19
CSNK1E-203ENST00000396832 SCN2AQ99250 2005 aa22.45■■□□□ 1.19
CSNK1E-203ENST00000396832 MMP20O60882 483 aa22.45■■□□□ 1.19
CSNK1E-203ENST00000396832 SOX30O94993 753 aa22.45■■□□□ 1.19
CSNK1E-203ENST00000396832 CD3GP09693 182 aa22.45■■□□□ 1.19
CSNK1E-203ENST00000396832 LASP1Q14847 261 aaKnown RBP22.45■■□□□ 1.19
CSNK1E-203ENST00000396832 LHX8Q68G74 356 aa22.45■■□□□ 1.19
CSNK1E-203ENST00000396832 ZNF547Q8IVP9 402 aa22.45■■□□□ 1.19
CSNK1E-203ENST00000396832 MORN4Q8NDC4 146 aa22.45■■□□□ 1.19
CSNK1E-203ENST00000396832 OR6M1Q8NGM8 313 aa22.45■■□□□ 1.19
CSNK1E-203ENST00000396832 ARMC5Q96C12 935 aa22.45■■□□□ 1.19
CSNK1E-203ENST00000396832 SLC38A2Q96QD8 506 aa22.45■■□□□ 1.19
CSNK1E-203ENST00000396832 REG4Q9BYZ8 158 aa22.45■■□□□ 1.19
CSNK1E-203ENST00000396832 SLC7A5P2Q9GIP4 190 aa22.45■■□□□ 1.19
CSNK1E-203ENST00000396832 TDP1Q9NUW8 608 aa22.45■■□□□ 1.19
CSNK1E-203ENST00000396832 RASD1Q9Y272 281 aa22.45■■□□□ 1.19
CSNK1E-203ENST00000396832 MTNR1BP49286 362 aa22.45■■□□□ 1.18
CSNK1E-203ENST00000396832 SIAH3Q8IW03 269 aa22.45■■□□□ 1.18
CSNK1E-203ENST00000396832 ZNF649Q9BS31 505 aa22.45■■□□□ 1.18
CSNK1E-203ENST00000396832 TM7SF3Q9NS93 570 aa22.45■■□□□ 1.18
CSNK1E-203ENST00000396832 IL36AQ9UHA7 158 aa22.45■■□□□ 1.18
CSNK1E-203ENST00000396832 SCN3AQ9NY46 2000 aa22.45■■□□□ 1.18
CSNK1E-203ENST00000396832 FAM183AA6NL82 134 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 POP7O75817 140 aaKnown RBP22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 H2AFB2P0C5Z0 115 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 NPR2P20594 1047 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 LCN1P31025 176 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 NUP62P37198 522 aaPredicted RBP22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 RNF144AP50876 292 aaPredicted RBP22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 SLC7A9P82251 487 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 LRRC56Q8IYG6 542 aaPredicted RBP22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 ZFPM2Q8WW38 1151 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 SHARPINQ9H0F6 387 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 KIF25Q9UIL4 384 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 CLEC4AQ9UMR7 237 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 SLC2A10O95528 541 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 ATP6V1E1P36543 226 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 ZP1P60852 638 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 ACSM1Q08AH1 577 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 KHDRBS2Q5VWX1 349 aaKnown RBP22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 OR5P2Q8WZ92 322 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 ZG16BQ96DA0 208 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 SLC35G5Q96KT7 338 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 ZNF558Q96NG5 402 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 METTL17Q9H7H0 456 aaPredicted RBP22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 ICKQ9UPZ9 632 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 SLC9A8Q9Y2E8 581 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 KCNE3Q9Y6H6 103 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 RGS9O75916 674 aaPredicted RBP22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 GSTM3P21266 225 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 SHC1P29353 583 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 GPR1P46091 355 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 ZSWIM7Q19AV6 140 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 PYHIN1Q6K0P9 492 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 CD99L2Q8TCZ2 262 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 ZNF689Q96CS4 500 aaPredicted RBP22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 TRMT61BQ9BVS5 477 aaKnown RBP22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 MS4A7Q9GZW8 240 aaPredicted RBP22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 SPRTNQ9H040 489 aaPredicted RBP22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 BTBD1Q9H0C5 482 aa22.44■■□□□ 1.18
CSNK1E-203ENST00000396832 LRRK1Q38SD2 2015 aa22.43■■□□□ 1.18
CSNK1E-203ENST00000396832 ZC3H12DA2A288 527 aaKnown RBP22.43■■□□□ 1.18
CSNK1E-203ENST00000396832 SYNDIG1LA6NDD5 238 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms