RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 CYS1Q717R9 158 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 NUFIP2Q7Z417 695 aaKnown RBP7.49□□□□□ -1.21
SCFD1-202ENST00000396629 CMC1Q7Z7K0 106 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 TBC1D1Q86TI0 1168 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-202ENST00000396629 MARCH3Q86UD3 253 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 GTF2IRD2Q86UP8 949 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 WDR75Q8IWA0 830 aaKnown RBP7.49□□□□□ -1.21
SCFD1-202ENST00000396629 ZNF619Q8N2I2 560 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 ZNF525Q8N782 197 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 OR2V1Q8NHB1 315 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 FAM168AQ92567 244 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 CDKL2Q92772 493 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 FRG2BQ96QU4 278 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 OSBPL9Q96SU4 736 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 FAIM2Q9BWQ8 316 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 ADAM19Q9H013 955 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 CBLN4Q9NTU7 201 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 TXNDC16Q9P2K2 825 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 OR10H1Q9Y4A9 318 aa7.49□□□□□ -1.21
SCFD1-202ENST00000396629 A0A0J9YW62 118 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 FAM159BA6NKW6 160 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 SEC31AO94979 1220 aaKnown RBP7.48□□□□□ -1.21
SCFD1-202ENST00000396629 ADAP00813 363 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 GFAPP14136 432 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 PTNP21246 168 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 USF1P22415 310 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-202ENST00000396629 CRABP2P29373 138 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 SPRP35270 261 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-202ENST00000396629 CLK3P49761 638 aaKnown RBP7.48□□□□□ -1.21
SCFD1-202ENST00000396629 RAC1P63000 192 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 IRF9Q00978 393 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 C17orf67Q0P5P2 114 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 P2RY6Q15077 328 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 GRTP1Q5TC63 336 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 ESPNLQ6ZVH7 1005 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 RAPH1Q70E73 1250 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 ZBED8Q8IZ13 594 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 RFLNBQ8N5W9 214 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 OR9A2Q8NGT5 310 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 KISS1RQ969F8 398 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-202ENST00000396629 CDK15Q96Q40 435 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 NOL11Q9H8H0 719 aaKnown RBP7.48□□□□□ -1.21
SCFD1-202ENST00000396629 MANSC1Q9H8J5 431 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 TAS2R9Q9NYW1 312 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 UTS2RQ9UKP6 389 aa7.48□□□□□ -1.21
SCFD1-202ENST00000396629 TNPO3Q9Y5L0 923 aaKnown RBP7.48□□□□□ -1.21
SCFD1-202ENST00000396629 A0A087WZY1 265 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 C7orf72A4D263 438 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 H7C417 338 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 TNFSF11O14788 317 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 IL33O95760 270 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 CSF3P09919 207 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 HNF1AP20823 631 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 PSMA4P25789 261 aaKnown RBP7.47□□□□□ -1.21
SCFD1-202ENST00000396629 SSTR1P30872 391 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 TTKP33981 857 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 ALDH9A1P49189 494 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 IFT88Q13099 833 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 ITGADQ13349 1161 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 RAB35Q15286 201 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 BHLHA15Q7RTS1 189 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-202ENST00000396629 CCDC25Q86WR0 208 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 TDRPQ86YL5 185 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 CENPLQ8N0S6 344 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-202ENST00000396629 GTPBP8Q8N3Z3 284 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-202ENST00000396629 BANPQ8N9N5 519 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 OR7G2Q8NG99 324 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 RNF128Q8TEB7 428 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 MTBPQ96DY7 904 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 NPAS1Q99742 590 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 SLC12A4Q9UP95 1085 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 MEGF8Q7Z7M0 2845 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 VWC2LB2RUY7 222 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 E7EQL1 145 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 NTN1O95631 604 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 ANGPTL1O95841 491 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 OPN1LWP04000 364 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 PABPC4LP0CB38 370 aaKnown RBP7.47□□□□□ -1.21
SCFD1-202ENST00000396629 CCNG1P51959 295 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 PRR5P85299 388 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 TRAF3Q13114 568 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 PPA1Q15181 289 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 DECR1Q16698 335 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 GGTA1PQ4G0N0 100 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 TMEM201Q5SNT2 666 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 PDSS1Q5T2R2 415 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 CPTPQ5TA50 214 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 HBMQ6B0K9 141 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 TTC19Q6DKK2 380 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-202ENST00000396629 APOOLQ6UXV4 268 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 C12orf54Q6X4T0 127 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 Q6ZSR9 355 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 SSX8Q7RTT4 187 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 TUSC5Q8IXB3 177 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 SAMD14Q8IZD0 417 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-202ENST00000396629 PYROXD1Q8WU10 500 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 KCTD4Q8WVF5 259 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 OSTF1Q92882 214 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 ATP6V1E2Q96A05 226 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 MSI2Q96DH6 328 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms