RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ZNF578Q96N58 590 aaPredicted RBP4.44□□□□□ -1.7
GABPB1-204ENST00000396464 TSG101Q99816 390 aa4.44□□□□□ -1.7
GABPB1-204ENST00000396464 EFHD1Q9BUP0 239 aa4.44□□□□□ -1.7
GABPB1-204ENST00000396464 MCRIP2Q9BUT9 160 aaKnown RBP4.44□□□□□ -1.7
GABPB1-204ENST00000396464 C9orf16Q9BUW7 83 aa4.44□□□□□ -1.7
GABPB1-204ENST00000396464 ZNF701Q9NV72 531 aaPredicted RBP4.44□□□□□ -1.7
GABPB1-204ENST00000396464 RBAKQ9NYW8 714 aaPredicted RBP4.44□□□□□ -1.7
GABPB1-204ENST00000396464 RNF7Q9UBF6 113 aa4.44□□□□□ -1.7
GABPB1-204ENST00000396464 UMODL1Q5DID0 1318 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 CCDC88BA6NC98 1476 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 LRP5LA4QPB2 252 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 TMEM210A6NLX4 147 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 OR7A17O14581 309 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 SH2D1BO14796 132 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 CLOCKO15516 846 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 COCHO43405 550 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 LRCH4O75427 683 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 RBBP9O75884 186 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 B3GAT3O94766 335 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 ERLIN2O94905 339 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 CLDN9O95484 217 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 H1F0P07305 194 aaKnown RBP4.43□□□□□ -1.7
GABPB1-204ENST00000396464 PNMA6AP0CW24 399 aaPredicted RBP4.43□□□□□ -1.7
GABPB1-204ENST00000396464 HSMCR30P0CW71 290 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 ANXA3P12429 323 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 CD82P27701 267 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 CD1CP29017 333 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 STX2P32856 288 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 SLC1A4P43007 532 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 NOVA1P51513 510 aaKnown RBP4.43□□□□□ -1.7
GABPB1-204ENST00000396464 SGSHP51688 502 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 PSMD4P55036 377 aaKnown RBP4.43□□□□□ -1.7
GABPB1-204ENST00000396464 ISL1P61371 349 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 MRPS6P82932 125 aaKnown RBP4.43□□□□□ -1.7
GABPB1-204ENST00000396464 NHLH1Q02575 133 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 CALCOCO2Q13137 446 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 FADDQ13158 208 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 KLF5Q13887 457 aaPredicted RBP4.43□□□□□ -1.7
GABPB1-204ENST00000396464 PAPPA-AS1Q5QFB9 102 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 THEM4Q5T1C6 240 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 ASPHD1Q5U4P2 390 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 RNLSQ5VYX0 342 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 SLC27A4Q6P1M0 643 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 ZNF562Q6V9R5 426 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 SLC29A4Q7RTT9 530 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 BHLHA9Q7RTU4 235 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 TMEM17Q86X19 198 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 CATSPERDQ86XM0 798 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 CMTM8Q8IZV2 173 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 PELI3Q8N2H9 469 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 LMNTD1Q8N9Z9 388 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 CYB561A3Q8NBI2 242 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 SLC35F5Q8WV83 523 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 TCP11Q8WWU5 503 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 CD101Q93033 1021 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 CPB2Q96IY4 423 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 FMO2Q99518 471 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 P2RY13Q9BPV8 354 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 TUBGCP2Q9BSJ2 902 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 BICC1Q9H694 974 aaKnown RBP4.43□□□□□ -1.7
GABPB1-204ENST00000396464 GPN2Q9H9Y4 310 aaPredicted RBP4.43□□□□□ -1.7
GABPB1-204ENST00000396464 UGT1A10Q9HAW8 530 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 NT5MQ9NPB1 228 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 FLRT3Q9NZU0 649 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 IFNKQ9P0W0 207 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 ZNF319Q9P2F9 582 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 SLC17A7Q9P2U7 560 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 FZR1Q9UM11 496 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 DDX19BQ9UMR2 479 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 ST3GAL5Q9UNP4 418 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 LAMC3Q9Y6N6 1575 aa4.43□□□□□ -1.7
GABPB1-204ENST00000396464 KIF21AQ7Z4S6 1674 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 TEX13DA0A0J9YY54 714 aaPredicted RBP4.42□□□□□ -1.7
GABPB1-204ENST00000396464 A0A1W2PPV9 198 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 C2CD4BA6NLJ0 364 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 CCT8L1PA6NM43 557 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 PRR32B1ATL7 298 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 FBP2O00757 339 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 IMPA2O14732 288 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 LDB2O43679 373 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 N4BP1O75113 896 aaKnown RBP4.42□□□□□ -1.7
GABPB1-204ENST00000396464 NXPH2O95156 264 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 IGF1P05019 195 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 STSP08842 583 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 ALOX5P09917 674 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 CBLP22681 906 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 CFHR2P36980 270 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 SLC1A2P43004 574 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 GYG1P46976 350 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 STK19P49842 368 aaPredicted RBP4.42□□□□□ -1.7
GABPB1-204ENST00000396464 ART1P52961 327 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 HMGCS2P54868 508 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 OSTNP61366 133 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 OC90Q02509 493 aaPredicted RBP4.42□□□□□ -1.7
GABPB1-204ENST00000396464 SRSF4Q08170 494 aaKnown RBP4.42□□□□□ -1.7
GABPB1-204ENST00000396464 MFGE8Q08431 387 aaPredicted RBP4.42□□□□□ -1.7
GABPB1-204ENST00000396464 SNTA1Q13424 505 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 ITGA9Q13797 1035 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 VAMP3Q15836 100 aa4.42□□□□□ -1.7
GABPB1-204ENST00000396464 FAM122CQ6P4D5 195 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms