RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 MAGEB1P43366 347 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 STARP49675 285 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 GZMMP51124 257 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 PRR5P85299 388 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 ST3GAL3Q11203 375 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 MLLT11Q13015 90 aaPredicted RBP12.4□□□□□ -0.42
NFKB1-202ENST00000394820 SNTA1Q13424 505 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 GPR135Q8IZ08 494 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 PLA2G15Q8NCC3 412 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 TOX2Q96NM4 488 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 ALG8Q9BVK2 526 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 ARL6Q9H0F7 186 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 GPATCH2Q9NW75 528 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 TMEM5Q9Y2B1 443 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 CHST2Q9Y4C5 530 aa12.4□□□□□ -0.42
NFKB1-202ENST00000394820 PRAMEF25A6NGN4 478 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 ZAR1LA6NP61 321 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 OR10H2O60403 315 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 CSNK2A2P19784 350 aaPredicted RBP12.4□□□□□ -0.43
NFKB1-202ENST00000394820 POU3F3P20264 500 aaPredicted RBP12.4□□□□□ -0.43
NFKB1-202ENST00000394820 PRMT2P55345 433 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 KIAA1024LP59773 190 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 SQSTM1Q13501 440 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 C18orf63Q68DL7 685 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 OR5P2Q8WZ92 322 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 SLC25A46Q96AG3 418 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 HYLS1Q96M11 299 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 PITX2Q99697 317 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 CCDC3Q9BQI4 270 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 GABARAPL3Q9BY60 117 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 OR51J1Q9H342 316 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 NARFLQ9H6Q4 476 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 CNOT2Q9NZN8 540 aaKnown RBP12.4□□□□□ -0.43
NFKB1-202ENST00000394820 SLC7A7Q9UM01 511 aa12.4□□□□□ -0.43
NFKB1-202ENST00000394820 A0A1W2PS29 197 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 BLOC1S5-TXNDC5H3BN57 136 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 SCN2BO60939 215 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 SPDEFO95238 335 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 C1orf105O95561 183 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 H2AFB2P0C5Z0 115 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 CERS1P27544 350 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 TRIM23P36406 574 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 SLC1A3P43003 542 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 CRYBB2P43320 205 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 C4orf46Q504U0 113 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 HENMT1Q5T8I9 393 aaKnown RBP12.39□□□□□ -0.43
NFKB1-202ENST00000394820 ELP2Q6IA86 826 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 REM2Q8IYK8 340 aaPredicted RBP12.39□□□□□ -0.43
NFKB1-202ENST00000394820 ARL14Q8N4G2 192 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 NANOGP1Q8N7R0 232 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 ZNF527Q8NB42 609 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 NUP43Q8NFH3 380 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 RPLP0P6Q8NHW5 317 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 ARRDC3Q96B67 414 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 NDC1Q9BTX1 674 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 BTBD1Q9H0C5 482 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 ATP13A2Q9NQ11 1180 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 EXO1Q9UQ84 846 aaKnown RBP12.39□□□□□ -0.43
NFKB1-202ENST00000394820 OR10H1Q9Y4A9 318 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 KCNE1BA0A087WTH5 132 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 TBC1D3DA0A087WVF3 549 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 TBC1D3IA0A087WXS9 549 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 TBC1D3EA0A087X179 549 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 TBC1D3KA0A087X1G2 549 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 TBC1D3FA6NER0 549 aaPredicted RBP12.39□□□□□ -0.43
NFKB1-202ENST00000394820 IGLON5A6NGN9 336 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 TBC1D3LB9A6J9 549 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 LGALS8O00214 317 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 QSOX1O00391 747 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 PRODHO43272 600 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 ADH1CP00326 375 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 IFNA7P01567 189 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 PRNPP04156 253 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 TBC1D3HP0C7X1 549 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 HSD3B1P14060 373 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 RAE1P78406 368 aaKnown RBP12.39□□□□□ -0.43
NFKB1-202ENST00000394820 GPR176Q14439 515 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 TRAM2Q15035 370 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 TBC1D3GQ6DHY5 549 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 TBC1D3CQ6IPX1 549 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 TBC1D3Q8IZP1 549 aaPredicted RBP12.39□□□□□ -0.43
NFKB1-202ENST00000394820 COX18Q8N8Q8 333 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 CHTF18Q8WVB6 975 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 SAV1Q9H4B6 383 aaPredicted RBP12.39□□□□□ -0.43
NFKB1-202ENST00000394820 TRIM36Q9NQ86 728 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 FFAR1O14842 300 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 FCMRO60667 390 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 RGS11O94810 467 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 IFNA16P05015 189 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 PSMA3P25788 255 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 GZMKP49863 264 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 KHKP50053 298 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 PGDP52209 483 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 FBXW4P57775 412 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 PSMA6P60900 246 aaKnown RBP12.39□□□□□ -0.43
NFKB1-202ENST00000394820 RHAGQ02094 409 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 SP140Q13342 867 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 OR14C36Q8NHC7 312 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 UPRTQ96BW1 309 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 ZNF354BQ96LW1 612 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms