RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 MBOAT1Q6ZNC8 495 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 CFAP77Q6ZQR2 320 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 WDR53Q7Z5U6 358 aaPredicted RBP10.44□□□□□ -0.74
CUX1-204ENST00000393824 GJD3Q8N144 294 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 CEP76Q8TAP6 659 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 GANCQ8TET4 914 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 RLN3Q8WXF3 142 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 ASB11Q8WXH4 323 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 FAM131CQ96AQ9 280 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 OTUB1Q96FW1 271 aaPredicted RBP10.44□□□□□ -0.74
CUX1-204ENST00000393824 TMEM168Q9H0V1 697 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 ZNF106Q9H2Y7 1883 aaKnown RBP10.44□□□□□ -0.74
CUX1-204ENST00000393824 RERGLQ9H628 205 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 TMEM38AQ9H6F2 299 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 TBC1D17Q9HA65 648 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 BRF2Q9HAW0 419 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 ZSCAN32Q9NX65 697 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 ZDHHC3Q9NYG2 299 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 PLXNB3Q9ULL4 1909 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 MEIKINA0A087WXM9 373 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 GABRR3A8MPY1 467 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 LINC01387J3KSC0 135 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 RNASET2O00584 256 aaKnown RBP10.44□□□□□ -0.74
CUX1-204ENST00000393824 KPNA5O15131 536 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 PAK4O96013 591 aaPredicted RBP10.44□□□□□ -0.74
CUX1-204ENST00000393824 ADH1BP00325 375 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 TP53P04637 393 aaPredicted RBP10.44□□□□□ -0.74
CUX1-204ENST00000393824 CHRM5P08912 532 aaPredicted RBP10.44□□□□□ -0.74
CUX1-204ENST00000393824 DNASE1P24855 282 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 SSTR2P30874 369 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 EPHA4P54764 986 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 SCARB2Q14108 478 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 GANABQ14697 944 aaKnown RBP10.44□□□□□ -0.74
CUX1-204ENST00000393824 ZMYND11Q15326 602 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 NHLRC3Q5JS37 347 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 FAM46CQ5VWP2 391 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 RAET1GQ6H3X3 334 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 PM20D2Q8IYS1 436 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 TCEANCQ8N8B7 351 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 UXS1Q8NBZ7 420 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 OR2T4Q8NH00 348 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 HUS1BQ8NHY5 278 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 CDC26Q8NHZ8 85 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 LGR4Q9BXB1 951 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 ABCG5Q9H222 651 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 SLC6A15Q9H2J7 730 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 MRPS18AQ9NVS2 196 aaKnown RBP10.44□□□□□ -0.74
CUX1-204ENST00000393824 SDHAF2Q9NX18 166 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 SLC39A1Q9NY26 324 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 SCP2D1Q9UJQ7 156 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 CA5BQ9Y2D0 317 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 HRH3Q9Y5N1 445 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 SLCO1B1Q9Y6L6 691 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 PIKFYVEQ9Y2I7 2098 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 MAN2B1O00754 1011 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 PTP4A3O75365 173 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 PEX14O75381 377 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 RAB3AP20336 220 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 TRIM23P36406 574 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 CRATP43155 626 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 GAS1P54826 345 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 EEF1A2Q05639 463 aaKnown RBP10.43□□□□□ -0.74
CUX1-204ENST00000393824 ACSM2AQ08AH3 577 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 ZXDCQ2QGD7 858 aaPredicted RBP10.43□□□□□ -0.74
CUX1-204ENST00000393824 TMEM52BQ4KMG9 183 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 ACSM2BQ68CK6 577 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 TMEM91Q6ZNR0 172 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 ASPGQ86U10 573 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 SLC30A8Q8IWU4 369 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 THAP7Q9BT49 309 aaPredicted RBP10.43□□□□□ -0.74
CUX1-204ENST00000393824 TPSD1Q9BZJ3 242 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 HDHD2Q9H0R4 259 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 DLL4Q9NR61 685 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 MGAT4BQ9UQ53 548 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 NUBP2Q9Y5Y2 271 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 CACNG2Q9Y698 323 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 PLXNA2O75051 1894 aa10.43□□□□□ -0.74
CUX1-204ENST00000393824 GFYI3L273 518 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 GPR171O14626 319 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 PLRG1O43660 514 aaKnown RBP10.42□□□□□ -0.74
CUX1-204ENST00000393824 SULT1A3P0DMM9 295 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 SULT1A4P0DMN0 295 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 ETFAP13804 333 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 XKP51811 444 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 DGKEP52429 567 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 CTSCP53634 463 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 RAG2P55895 527 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 CHIT1Q13231 466 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 GCNT6Q5T4J0 391 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 HACD4Q5VWC8 232 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 BCDIN3DQ7Z5W3 292 aaKnown RBP10.42□□□□□ -0.74
CUX1-204ENST00000393824 ARIH2OSQ8N7S6 290 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 OR8D4Q8NGM9 314 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 WDR20Q8TBZ3 569 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 ACOT12Q8WYK0 555 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 RFT1Q96AA3 541 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 OTULINQ96BN8 352 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 PELOQ9BRX2 385 aaKnown RBP10.42□□□□□ -0.74
CUX1-204ENST00000393824 POLDIP3Q9BY77 421 aaKnown RBP10.42□□□□□ -0.74
CUX1-204ENST00000393824 RBCK1Q9BYM8 510 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms