RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 IL5RAQ01344 420 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 NPRL3Q12980 569 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 SEC23BQ15437 767 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 DECR1Q16698 335 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 ENTPD8Q5MY95 495 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 PODNL1Q6PEZ8 512 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 SLC29A4Q7RTT9 530 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 THAP5Q7Z6K1 395 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 RANBP3LQ86VV4 465 aaPredicted RBP7.99□□□□□ -1.13
TDP1-203ENST00000393454 TSPYL5Q86VY4 417 aaPredicted RBP7.99□□□□□ -1.13
TDP1-203ENST00000393454 BMPERQ8N8U9 685 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 RNF217Q8TC41 542 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 SLC7A13Q8TCU3 470 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 NR4A3Q92570 626 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 MR1Q95460 341 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 EFHD2Q96C19 240 aaPredicted RBP7.99□□□□□ -1.13
TDP1-203ENST00000393454 DHRS1Q96LJ7 313 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 ULBP3Q9BZM4 244 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 STRADBQ9C0K7 418 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 ZNF696Q9H7X3 374 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 FBXO8Q9NRD0 319 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 SEMA4GQ9NTN9 838 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 COL5A1P20908 1838 aaPredicted RBP7.99□□□□□ -1.13
TDP1-203ENST00000393454 KIF26BQ2KJY2 2108 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 CACNA1HO95180 2353 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 SPEGQ15772 3267 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 A0A1W2PRQ8 180 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 SH3PXD2BA1X283 911 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 SYNDIG1LA6NDD5 238 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 H3BNH8 94 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 CYP7B1O75881 506 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 OXSR1O95747 527 aaPredicted RBP7.99□□□□□ -1.13
TDP1-203ENST00000393454 IGKV3-11P04433 115 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 ATP6V1B1P15313 513 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 CBLP22681 906 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 ELK4P28324 431 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 EPHA2P29317 976 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 GSSP48637 474 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 UGT2B15P54855 530 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 PSMD4P55036 377 aaKnown RBP7.99□□□□□ -1.13
TDP1-203ENST00000393454 ST3GAL3Q11203 375 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 TARDBPQ13148 414 aaKnown RBP eCLIP7.99□□□□□ -1.13
TDP1-203ENST00000393454 DGCR6Q14129 220 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 ZNF385CQ66K41 422 aaPredicted RBP7.99□□□□□ -1.13
TDP1-203ENST00000393454 FAM199XQ6PEV8 388 aaPredicted RBP7.99□□□□□ -1.13
TDP1-203ENST00000393454 RRM2BQ7LG56 351 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 ANKRD37Q7Z713 158 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 SUMF1Q8NBK3 374 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 MORN4Q8NDC4 146 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 SETD9Q8NE22 299 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 OR1N1Q8NGS0 311 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 ADAMTS16Q8TE57 1224 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 SLC38A4Q969I6 547 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 PMEPA1Q969W9 287 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 FKBP10Q96AY3 582 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 LCORQ96JN0 433 aaPredicted RBP7.99□□□□□ -1.13
TDP1-203ENST00000393454 LMF1Q96S06 567 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 CRB3Q9BUF7 120 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 GRIP2Q9C0E4 1043 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 NRSN2Q9GZP1 204 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 NXF5Q9H1B4 397 aaKnown RBP7.99□□□□□ -1.13
TDP1-203ENST00000393454 ADNPQ9H2P0 1102 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 AKIRIN1Q9H9L7 192 aaPredicted RBP7.99□□□□□ -1.13
TDP1-203ENST00000393454 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.99□□□□□ -1.13
TDP1-203ENST00000393454 MGAT4BQ9UQ53 548 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 LOXL2Q9Y4K0 774 aa7.99□□□□□ -1.13
TDP1-203ENST00000393454 ZNF318Q5VUA4 2279 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 CDC14CA4D256 554 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 CDHR4A6H8M9 788 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 ARRDC5A6NEK1 342 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 PRG2P13727 222 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 HPGDP15428 266 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 ITIH1P19827 911 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 POU1F1P28069 291 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 SLC5A2P31639 672 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 CCKBRP32239 447 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 NR0B1P51843 470 aaKnown RBP7.98□□□□□ -1.13
TDP1-203ENST00000393454 ATP12AP54707 1039 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 CLDN6P56747 220 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 RPP38P78345 283 aaKnown RBP7.98□□□□□ -1.13
TDP1-203ENST00000393454 E2F1Q01094 437 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 IL18R1Q13478 541 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 RAPSNQ13702 412 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 KEAP1Q14145 624 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 TRAM2Q15035 370 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 MEP1AQ16819 746 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 RNF220Q5VTB9 566 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 ZNF691Q5VV52 312 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 ZNF730Q6ZMV8 503 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 Q6ZPB1 254 aaPredicted RBP7.98□□□□□ -1.13
TDP1-203ENST00000393454 C9orf40Q8IXQ3 194 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 PRR22Q8IZ63 422 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 TSPAN14Q8NG11 270 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 CNOT9Q92600 299 aaKnown RBP7.98□□□□□ -1.13
TDP1-203ENST00000393454 SLC41A3Q96GZ6 507 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 CDC6Q99741 560 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 APOL4Q9BPW4 351 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 PSD2Q9BQI7 771 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 UCK2Q9BZX2 261 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 MAN2C1Q9NTJ4 1040 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms