RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 CDRT4Q8N9R6 151 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 C16orf52Q8NHV5 167 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 PTPMT1Q8WUK0 201 aaPredicted RBP13.88□□□□□ -0.19
MKS1-202ENST00000393119 PSD2Q9BQI7 771 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 FUZQ9BT04 418 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 FNDC11Q9BVV2 318 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 BTBD2Q9BX70 525 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 PINK1Q9BXM7 581 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 ZNF350Q9GZX5 532 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 POLR1BQ9H9Y6 1135 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 FLRT3Q9NZU0 649 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 CDC14CA4D256 554 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 C17orf105B2RV13 164 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 CLDN4O14493 209 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 HLCSP50747 726 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 CD300CQ08708 224 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 RGS21Q2M5E4 152 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 DCST1Q5T197 706 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 CCDC103Q8IW40 242 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 GPR135Q8IZ08 494 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 NDC1Q9BTX1 674 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 MROQ9BYG7 248 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 NRSN2Q9GZP1 204 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 ARRDC1-AS1Q9H2J1 176 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 OCIAD1Q9NX40 245 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 SUSD2Q9UGT4 822 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 ACAD8Q9UKU7 415 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 RNF6Q9Y252 685 aa13.88□□□□□ -0.19
MKS1-202ENST00000393119 FER1L5A0AVI2 2057 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 AGAP5A6NIR3 686 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 WBP4O75554 376 aaKnown RBP13.87□□□□□ -0.19
MKS1-202ENST00000393119 SEC14L2O76054 403 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 ZNF182P17025 639 aaPredicted RBP13.87□□□□□ -0.19
MKS1-202ENST00000393119 GCGRP47871 477 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 NUDT6P53370 316 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 CLDN6P56747 220 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 MVKQ03426 396 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 TARDBPQ13148 414 aaKnown RBP eCLIP13.87□□□□□ -0.19
MKS1-202ENST00000393119 ATP1A4Q13733 1029 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 ENTPD8Q5MY95 495 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 MRPL2Q5T653 305 aaKnown RBP13.87□□□□□ -0.19
MKS1-202ENST00000393119 LCN10Q6JVE6 187 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 PGBD2Q6P3X8 592 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 C16orf87Q6PH81 154 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 LANCL3Q6ZV70 420 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 KCTD8Q6ZWB6 473 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 BCDIN3DQ7Z5W3 292 aaKnown RBP13.87□□□□□ -0.19
MKS1-202ENST00000393119 ZER1Q7Z7L7 766 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 IQCF1Q8N6M8 205 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 IFI44Q8TCB0 444 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 CCDC74BQ96LY2 380 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 VSTM2LQ96N03 204 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 ARHGDIGQ99819 225 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 ITPAQ9BY32 194 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 OR10A5Q9H207 317 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 ZNF768Q9H5H4 540 aaKnown RBP13.87□□□□□ -0.19
MKS1-202ENST00000393119 MTHFD2LQ9H903 347 aaPredicted RBP13.87□□□□□ -0.19
MKS1-202ENST00000393119 GPN2Q9H9Y4 310 aaPredicted RBP13.87□□□□□ -0.19
MKS1-202ENST00000393119 MRPS33Q9Y291 106 aaKnown RBP13.87□□□□□ -0.19
MKS1-202ENST00000393119 SLC9A8Q9Y2E8 581 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 C17orf51A8MQB3 221 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 H0YIG0 161 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 SLC1A7O00341 560 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 ARHGAP33O14559 1287 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 UGT2B11O75310 529 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 SP9P0CG40 484 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 CT45A8P0DMV1 189 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 CT45A9P0DMV2 189 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 CHMP24386 653 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 EEF1A1P68104 462 aaKnown RBP13.87□□□□□ -0.19
MKS1-202ENST00000393119 POU6F2P78424 691 aaPredicted RBP13.87□□□□□ -0.19
MKS1-202ENST00000393119 IGLV3-21P80748 117 aaPredicted RBP13.87□□□□□ -0.19
MKS1-202ENST00000393119 GNA13Q14344 377 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 PTGES3Q15185 160 aaKnown RBP13.87□□□□□ -0.19
MKS1-202ENST00000393119 RFX4Q33E94 735 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 CT45A2Q5DJT8 189 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 PDZK1Q5T2W1 519 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 PWWP2BQ6NUJ5 590 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 PRICKLE2Q7Z3G6 844 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 PRSS42Q7Z5A4 293 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 IGFN1Q86VF2 1251 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 ZSCAN1Q8NBB4 408 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 RASSF5Q8WWW0 418 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 ZC3H10Q96K80 434 aaKnown RBP13.87□□□□□ -0.19
MKS1-202ENST00000393119 DUSP23Q9BVJ7 150 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 OR8D2Q9GZM6 311 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 LRRN3Q9H3W5 708 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 ZNF304Q9HCX3 659 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 C11orf16Q9NQ32 467 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 PRDM9Q9NQV7 894 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 ERVK-18Q9QC07 812 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 REV1Q9UBZ9 1251 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 SERTAD3Q9UJW9 196 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 R4GN57 208 aa13.87□□□□□ -0.19
MKS1-202ENST00000393119 A0A087WUU8 490 aa13.86□□□□□ -0.19
MKS1-202ENST00000393119 E9PQ18 207 aa13.86□□□□□ -0.19
MKS1-202ENST00000393119 PIP5K1CO60331 668 aa13.86□□□□□ -0.19
MKS1-202ENST00000393119 STX11O75558 287 aa13.86□□□□□ -0.19
MKS1-202ENST00000393119 FUT1P19526 365 aa13.86□□□□□ -0.19
MKS1-202ENST00000393119 MMP11P24347 488 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms