RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 ZNF527Q8NB42 609 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 ZFP62Q8NB50 900 aaPredicted RBP13.65□□□□□ -0.22
SUMO1-203ENST00000392246 SLC38A5Q8WUX1 472 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 NTNG2Q96CW9 530 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 TMEM41AQ96HV5 264 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 NSL1Q96IY1 281 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 TAAR6Q96RI8 345 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 ECSITQ9BQ95 431 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 SAP130Q9H0E3 1048 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 GALNT9Q9HCQ5 603 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 A4GALTQ9NPC4 353 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 SDHAF3Q9NRP4 125 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 TUBA8Q9NY65 449 aaPredicted RBP13.65□□□□□ -0.22
SUMO1-203ENST00000392246 CALML5Q9NZT1 146 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 MKLN1Q9UL63 735 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 BOKQ9UMX3 212 aaPredicted RBP13.65□□□□□ -0.22
SUMO1-203ENST00000392246 PINLYPA6NC86 204 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 ALG1L2C9J202 215 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 NPIPB9F8W1W9 429 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 KIAA0513O60268 411 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 TRIM3O75382 744 aaPredicted RBP13.64□□□□□ -0.23
SUMO1-203ENST00000392246 CRYABP02511 175 aaKnown RBP13.64□□□□□ -0.23
SUMO1-203ENST00000392246 PRB1P04280 392 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 BCHEP06276 602 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 CHRM4P08173 479 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 ARAFP10398 606 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 ESRRAP11474 423 aaPredicted RBP13.64□□□□□ -0.23
SUMO1-203ENST00000392246 SLC6A2P23975 617 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 MASP1P48740 699 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 CRISP3P54108 245 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 GAS1P54826 345 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 PMP22Q01453 160 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 PLGLB1Q02325 96 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 CHRNEQ04844 493 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 FOXO1Q12778 655 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 RABL3Q5HYI8 236 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 FAM180AQ6UWF9 173 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 OLIG3Q7RTU3 272 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 SERPINA11Q86U17 422 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 ZNF619Q8N2I2 560 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 METTL25Q8N6Q8 603 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 OR10A6Q8NH74 314 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 PMM1Q92871 262 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 MAL2Q969L2 176 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 TMEM19Q96HH6 336 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 ZNF597Q96LX8 424 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 JSRP1Q96MG2 331 aaPredicted RBP13.64□□□□□ -0.23
SUMO1-203ENST00000392246 FRMD6Q96NE9 622 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 GPATCH1Q9BRR8 931 aaKnown RBP13.64□□□□□ -0.23
SUMO1-203ENST00000392246 TMEM38AQ9H6F2 299 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 MTHFD2LQ9H903 347 aaPredicted RBP13.64□□□□□ -0.23
SUMO1-203ENST00000392246 HHATLQ9HCP6 504 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 ZFP64Q9NPA5 681 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 RALYQ9UKM9 306 aaKnown RBP13.64□□□□□ -0.23
SUMO1-203ENST00000392246 AP3M1Q9Y2T2 418 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 WIF1Q9Y5W5 379 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 NPIPA5A0A0B4J1W7 369 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 A0A1W2PQD3 144 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 C2orf72A6NCS6 295 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 B8ZZF3 427 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 C5orf58C9J3I9 102 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 NPIPA7E9PJI5 369 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 SUV39H1O43463 412 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 SCO2O43819 266 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 ZIC2O95409 532 aaPredicted RBP13.64□□□□□ -0.23
SUMO1-203ENST00000392246 CBX6O95503 412 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 NPIPA8P0DM63 369 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 CBX1P83916 185 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 INPP5JQ15735 1006 aaPredicted RBP13.64□□□□□ -0.23
SUMO1-203ENST00000392246 MAPK11Q15759 364 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 ZNF141Q15928 474 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 CYP51A1Q16850 503 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 ZNF630Q2M218 657 aaPredicted RBP13.64□□□□□ -0.23
SUMO1-203ENST00000392246 KLHL26Q53HC5 615 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 PRAMEF8Q5VWM4 474 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 PRAMEF7Q5VXH5 474 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 C8orf82Q6P1X6 216 aaPredicted RBP13.64□□□□□ -0.23
SUMO1-203ENST00000392246 APOOLQ6UXV4 268 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 MARCH3Q86UD3 253 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 ZNF843Q8N446 348 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 OR1J4Q8NGS1 313 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 OIT3Q8WWZ8 545 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 SNRNP40Q96DI7 357 aaKnown RBP13.64□□□□□ -0.23
SUMO1-203ENST00000392246 SPATA9Q9BWV2 254 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 TTTY12Q9BZ98 90 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 SLC38A1Q9H2H9 487 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 RUBCNLQ9H714 662 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 L3MBTL1Q9Y468 752 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 DTNAQ9Y4J8 743 aa13.64□□□□□ -0.23
SUMO1-203ENST00000392246 A0A0G2JPF8 293 aa13.63□□□□□ -0.23
SUMO1-203ENST00000392246 HNRNPCL2B2RXH8 293 aa13.63□□□□□ -0.23
SUMO1-203ENST00000392246 HNRNPCL3B7ZW38 293 aa13.63□□□□□ -0.23
SUMO1-203ENST00000392246 H3BNH8 94 aa13.63□□□□□ -0.23
SUMO1-203ENST00000392246 ACOT7O00154 380 aa13.63□□□□□ -0.23
SUMO1-203ENST00000392246 SNPHO15079 494 aa13.63□□□□□ -0.23
SUMO1-203ENST00000392246 NDUFB5O43674 189 aa13.63□□□□□ -0.23
SUMO1-203ENST00000392246 HNRNPCL1O60812 293 aaKnown RBP13.63□□□□□ -0.23
SUMO1-203ENST00000392246 UGT2B17O75795 530 aa13.63□□□□□ -0.23
SUMO1-203ENST00000392246 ANGPTL1O95841 491 aa13.63□□□□□ -0.23
SUMO1-203ENST00000392246 HNRNPCL4P0DMR1 293 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms