RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 SPRR2GQ9BYE4 73 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 LRRC2Q9BYS8 371 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 ZHX3Q9H4I2 956 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 PNPLA3Q9NST1 481 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 MIS18AQ9NYP9 233 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 C9orf78Q9NZ63 289 aaPredicted RBP-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 CDH9Q9ULB4 789 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 SLC9A8Q9Y2E8 581 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 SSPOA2VEC9 5147 aa-0.41□□□□□ -2.47
SNORA40-201ENST00000388090 LOC105371045A0A1W2PR82 267 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 SULT2B1O00204 365 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 IGLV6-57P01721 117 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 ADRA2AP08913 450 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 PAX3P23760 479 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 COX7A1P24310 79 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 KIR2DS2P43631 304 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 RPL29P47914 159 aaKnown RBP-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 LIM2P55344 173 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 PTENP60484 403 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 C17orf67Q0P5P2 114 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 STK4Q13043 487 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 KLF5Q13887 457 aaPredicted RBP-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 CRY2Q49AN0 593 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 ZNF789Q5FWF6 425 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 UNQ9370/PRO34162Q6UXP9 181 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 DNM1P46Q6ZS02 220 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 ARMCX2Q7L311 632 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 PNKDQ8N490 385 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 PI4KAP1Q8N8J0 262 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 NPBQ8NG41 125 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 ATP6V0A1Q93050 837 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 COG3Q96JB2 828 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 TAAR1Q96RJ0 339 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 TMEM245Q9H330 911 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 LMAN1LQ9HAT1 526 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 GPR173Q9NS66 373 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 GIMAP2Q9UG22 337 aa-0.41□□□□□ -2.48
SNORA40-201ENST00000388090 IGLV11-55A0A075B6I3 123 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 SMIM28A0A1B0GU29 152 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 hCG_1807616A0A1W2PRN6 198 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 ILVBLA1L0T0 632 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 EI24O14681 340 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 ZNF780AO75290 641 aaPredicted RBP-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 TNFSF13O75888 250 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 AKAP3O75969 853 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 PGM3O95394 542 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 EPOP01588 193 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 GSTA2P09210 222 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 TLX1NBP0CAT3 122 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 GZMMP51124 257 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 RPS4XP62701 263 aaKnown RBP-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 PLOD1Q02809 727 aaPredicted RBP-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 ARFRP1Q13795 201 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 CYP51A1Q16850 503 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 SPOUT1Q5T280 376 aaKnown RBP-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 C6orf89Q6UWU4 347 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 SPNS3Q6ZMD2 512 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 RFLNAQ6ZTI6 216 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 ZNF573Q86YE8 665 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 COLGALT1Q8NBJ5 622 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 OR52J3Q8NH60 311 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 OCC1Q8TAD7 63 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 HEXDCQ8WVB3 486 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 SELENOMQ8WWX9 145 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 RIT1Q92963 219 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 LHX4Q969G2 390 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 EVI5LQ96CN4 794 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 TM2D3Q9BRN9 247 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 ZNF416Q9BWM5 594 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 HAUS2Q9NVX0 235 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 SLCO1C1Q9NYB5 712 aa-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 WRAP73Q9P2S5 460 aaPredicted RBP-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 SF3B1O75533 1304 aaKnown RBP eCLIP-0.42□□□□□ -2.48
SNORA40-201ENST00000388090 RSF1Q96T23 1441 aaPredicted RBP-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 J3KRW8 73 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 CHUKO15111 745 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 SRP72O76094 671 aaKnown RBP-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 VAMP5O95183 116 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 SNAPINO95295 136 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 CPNE6O95741 557 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 SLC4A1P02730 911 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 PGK2P07205 417 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 CD55P08174 381 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 THRBP10828 461 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 PSMC3P17980 439 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 TCN2P20062 427 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 MAT2AP31153 395 aaKnown RBP-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 GCKP35557 465 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 CSNK1G2P78368 415 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 CDKL1Q00532 357 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 ZNF816Q0VGE8 651 aaPredicted RBP-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 TMEM95Q3KNT9 176 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 WDR78Q5VTH9 848 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 SIGLEC15Q6ZMC9 328 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 TSEN54Q7Z6J9 526 aaKnown RBP-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 PHLDB2Q86SQ0 1253 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 KIAA0895Q8NCT3 520 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 CKAP2Q8WWK9 683 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 RAB7BQ96AH8 199 aa-0.43□□□□□ -2.48
SNORA40-201ENST00000388090 TMEM80Q96HE8 168 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms