RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 OPN1LWP04000 364 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 ACP2P11117 423 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 CCKARP32238 428 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 KIR2DL2P43627 348 aaPredicted RBP12.75□□□□□ -0.37
SHOX-202ENST00000381575 RNF144AP50876 292 aaPredicted RBP12.75□□□□□ -0.37
SHOX-202ENST00000381575 ADAM8P78325 824 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 PON3Q15166 354 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 BCL2A1Q16548 175 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 DEFB113Q30KQ7 82 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 RFTN2Q52LD8 501 aaPredicted RBP12.75□□□□□ -0.37
SHOX-202ENST00000381575 FIGNL1Q6PIW4 674 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 ZNF474Q6S9Z5 364 aaPredicted RBP12.75□□□□□ -0.37
SHOX-202ENST00000381575 TDRPQ86YL5 185 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 WFDC11Q8NEX6 87 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 PPCDCQ96CD2 204 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 PGM2Q96G03 612 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 C16orf58Q96GQ5 468 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 DACH2Q96NX9 599 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 PTGES2Q9H7Z7 377 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 SDHAF3Q9NRP4 125 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 FBXO34Q9NWN3 711 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 SH3BP4Q9P0V3 963 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 TESMINQ9Y4I5 508 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 USF3Q68DE3 2245 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 MSTNO14793 375 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 RGS14O43566 566 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 KCNH1O95259 989 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 PRPS2P11908 318 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 PRPH2P23942 346 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 MANFP55145 182 aaKnown RBP12.74□□□□□ -0.37
SHOX-202ENST00000381575 NAA20P61599 178 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 SLC18A2Q05940 514 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 GANABQ14697 944 aaKnown RBP12.74□□□□□ -0.37
SHOX-202ENST00000381575 KANK2Q63ZY3 851 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 ZCCHC23Q6ZST2 131 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 ZNF550Q7Z398 422 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 DDIASQ8IXT1 998 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 NUP43Q8NFH3 380 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 NUDT8Q8WV74 236 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 MBD6Q96DN6 1003 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 GIMAP5Q96F15 307 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 SH3YL1Q96HL8 342 aaPredicted RBP12.74□□□□□ -0.37
SHOX-202ENST00000381575 FCRL1Q96LA6 429 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 WFIKKN1Q96NZ8 548 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 CCT7Q99832 543 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 PIGQQ9BRB3 760 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 REEP4Q9H6H4 257 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 MRTO4Q9UKD2 239 aaKnown RBP12.74□□□□□ -0.37
SHOX-202ENST00000381575 CLEC4AQ9UMR7 237 aa12.74□□□□□ -0.37
SHOX-202ENST00000381575 WBP11Q9Y2W2 641 aaKnown RBP12.74□□□□□ -0.37
SHOX-202ENST00000381575 CSPG4Q6UVK1 2322 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 NPIPB8E9PQR5 432 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 H3BQF6 201 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 CASKO14936 926 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 PIP5K1BO14986 540 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 LSM1O15116 133 aaKnown RBP12.73□□□□□ -0.37
SHOX-202ENST00000381575 TRIM13O60858 407 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 SPAG7O75391 227 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 AQP8O94778 261 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 OXSR1O95747 527 aaPredicted RBP12.73□□□□□ -0.37
SHOX-202ENST00000381575 CD53P19397 219 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 ALDH3A1P30838 453 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 MAP3K8P41279 467 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 SLC6A8P48029 635 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 KCNJ5P48544 419 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 CLK3P49761 638 aaKnown RBP12.73□□□□□ -0.37
SHOX-202ENST00000381575 PSMD4P55036 377 aaKnown RBP12.73□□□□□ -0.37
SHOX-202ENST00000381575 DUSP5Q16690 384 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 CCNJQ5T5M9 372 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 ANKRD34AQ69YU3 496 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 OR2A2Q6IF42 318 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 GGNQ86UU5 652 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 SLC16A11Q8NCK7 471 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 OR4C3Q8NH37 302 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 TWIST2Q8WVJ9 160 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 JADE3Q92613 823 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 ZC3HAV1LQ96H79 300 aaKnown RBP12.73□□□□□ -0.37
SHOX-202ENST00000381575 TMEM185BQ9H7F4 350 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 C3orf14Q9HBI5 128 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 SLC17A7Q9P2U7 560 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 NDRG3Q9UGV2 375 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 EDARQ9UNE0 448 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 EIF3LQ9Y262 564 aaKnown RBP12.73□□□□□ -0.37
SHOX-202ENST00000381575 DNAJC15Q9Y5T4 150 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 ABCA2Q9BZC7 2435 aa12.73□□□□□ -0.37
SHOX-202ENST00000381575 RAI1Q7Z5J4 1906 aaPredicted RBP12.73□□□□□ -0.37
SHOX-202ENST00000381575 EIF1AYO14602 144 aaKnown RBP12.72□□□□□ -0.37
SHOX-202ENST00000381575 TNFRSF21O75509 655 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 KCNK2O95069 426 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 NKX2-2O95096 273 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 NEFHP12036 1026 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 BCKDHAP12694 445 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 POU2F1P14859 743 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 CD79BP40259 229 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 EIF1AXP47813 144 aaKnown RBP12.72□□□□□ -0.37
SHOX-202ENST00000381575 PRR5P85299 388 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 PDE7AQ13946 482 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 EXOC3L2Q2M3D2 409 aa12.72□□□□□ -0.37
SHOX-202ENST00000381575 MFSD12Q6NUT3 480 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms