RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 DAB2P98082 770 aa13.33□□□□□ -0.28
CLCN4-201ENST00000380829 TARDBPQ13148 414 aaKnown RBP eCLIP13.33□□□□□ -0.28
CLCN4-201ENST00000380829 PIN1Q13526 163 aaPredicted RBP13.33□□□□□ -0.28
CLCN4-201ENST00000380829 BAK1Q16611 211 aa13.33□□□□□ -0.28
CLCN4-201ENST00000380829 PROX2Q3B8N5 592 aa13.33□□□□□ -0.28
CLCN4-201ENST00000380829 PAMR1Q6UXH9 720 aa13.33□□□□□ -0.28
CLCN4-201ENST00000380829 RNF44Q7L0R7 432 aa13.33□□□□□ -0.28
CLCN4-201ENST00000380829 CSNK1A1LQ8N752 337 aa13.33□□□□□ -0.28
CLCN4-201ENST00000380829 OR4K14Q8NGD5 310 aa13.33□□□□□ -0.28
CLCN4-201ENST00000380829 BBS10Q8TAM1 723 aa13.33□□□□□ -0.28
CLCN4-201ENST00000380829 GIMAP5Q96F15 307 aa13.33□□□□□ -0.28
CLCN4-201ENST00000380829 CEP19Q96LK0 163 aa13.33□□□□□ -0.28
CLCN4-201ENST00000380829 FAM60AQ9NP50 221 aa13.33□□□□□ -0.28
CLCN4-201ENST00000380829 SLC22A7Q9Y694 548 aa13.33□□□□□ -0.28
CLCN4-201ENST00000380829 FAM170BA6NMN3 283 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 LEUTXA8MZ59 168 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 LDB3O75112 727 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 ELAVL4P26378 380 aaKnown RBP13.32□□□□□ -0.28
CLCN4-201ENST00000380829 TLX1P31314 330 aaPredicted RBP13.32□□□□□ -0.28
CLCN4-201ENST00000380829 NUDT1P36639 197 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 LEXMQ3ZCV2 418 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 ZNF770Q6IQ21 691 aaPredicted RBP13.32□□□□□ -0.28
CLCN4-201ENST00000380829 KLHL17Q6TDP4 642 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 CYP4Z2PQ8N1L4 340 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 UBE2J2Q8N2K1 259 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 TMEM52Q8NDY8 209 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 ZG16BQ96DA0 208 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 CCDC3Q9BQI4 270 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 BCL2L10Q9HD36 194 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 CTPS2Q9NRF8 586 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 CCDC59Q9P031 241 aaKnown RBP13.32□□□□□ -0.28
CLCN4-201ENST00000380829 MUTYHQ9UIF7 546 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 KLK4Q9Y5K2 254 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 A8MUA0 341 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 SMLR1H3BR10 107 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 SHOXO15266 292 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 RPLP0P05388 317 aaKnown RBP13.32□□□□□ -0.28
CLCN4-201ENST00000380829 H1F0P07305 194 aaKnown RBP13.32□□□□□ -0.28
CLCN4-201ENST00000380829 PSKH1P11801 424 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 ZNF10P21506 573 aaPredicted RBP13.32□□□□□ -0.28
CLCN4-201ENST00000380829 MAN2A2P49641 1150 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 AP2S1P53680 142 aaPredicted RBP13.32□□□□□ -0.28
CLCN4-201ENST00000380829 UGT2B15P54855 530 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 CXCR4P61073 352 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 MADCAM1Q13477 382 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 ARMC6Q6NXE6 501 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 CACTIN-AS1Q8N1I8 211 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 SLC16A11Q8NCK7 471 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 KBTBD8Q8NFY9 601 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 TMCO6Q96DC7 493 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 SLC30A2Q9BRI3 323 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 COPS4Q9BT78 406 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 GON7Q9BXV9 100 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 CCNB1IP1Q9NPC3 277 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 TMCC3Q9ULS5 477 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 SLC6A14Q9UN76 642 aa13.32□□□□□ -0.28
CLCN4-201ENST00000380829 A8MVJ9 347 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 RGS5O15539 181 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 SNX4O95219 450 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 CSF2P04141 144 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 HSMCR30P0CW71 290 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 IL9P15248 144 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 POU1F1P28069 291 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 SHC2P98077 582 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 BTBD16Q32M84 506 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 DCST1Q5T197 706 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 SLC46A3Q7Z3Q1 461 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 P3H2Q8IVL5 708 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 OR6T1Q8NGN1 323 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 ZFAND1Q8TCF1 268 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 DEDD2Q8WXF8 326 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 SIGLEC11Q96RL6 698 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 ACTRT3Q9BYD9 372 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 SLC38A1Q9H2H9 487 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 IL21RQ9HBE5 538 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 A4GNTQ9UNA3 340 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 A3GALT2U3KPV4 340 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 TMEM265A0A087WTH1 108 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 A0A0G2JPF8 293 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 PNMA8CA0A1B0GUJ8 204 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 HNRNPCL2B2RXH8 293 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 HNRNPCL3B7ZW38 293 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 SGK494L7N484 410 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 OR10H3O60404 316 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 HNRNPCL4P0DMR1 293 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 CD38P28907 300 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 FAPQ12884 760 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 GNA13Q14344 377 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 PTGES3Q15185 160 aaKnown RBP13.31□□□□□ -0.28
CLCN4-201ENST00000380829 PTCRAQ6ISU1 281 aaPredicted RBP13.31□□□□□ -0.28
CLCN4-201ENST00000380829 C16orf62Q7Z3J2 963 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 ZNF655Q8N720 491 aaPredicted RBP13.31□□□□□ -0.28
CLCN4-201ENST00000380829 AVL9Q8NBF6 648 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 TOR1AIP2Q8NFQ8 470 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 OR4M2Q8NGB6 313 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 SLC9A6Q92581 669 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 TRMT61AQ96FX7 289 aaKnown RBP13.31□□□□□ -0.28
CLCN4-201ENST00000380829 SLC35A4Q96G79 324 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 CCDC32Q9BV29 185 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 MS4A12Q9NXJ0 267 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms