RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 GON7Q9BXV9 100 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 POLE3Q9NRF9 147 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 PRODH2Q9UF12 536 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 CLEC2DQ9UHP7 191 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 SHANK3Q9BYB0 1731 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 KIAA1217Q5T5P2 1943 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 GFYI3L273 518 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 ELAVL4P26378 380 aaKnown RBP11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 C3orf38Q5JPI3 329 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 FCRLBQ6BAA4 426 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 FIGLAQ6QHK4 219 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 LRRN1Q6UXK5 716 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 SLC39A5Q6ZMH5 540 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 CYHR1Q6ZMK1 362 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 BTN2A1Q7KYR7 527 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 VRK2Q86Y07 508 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 POTEKPQ9BYX7 375 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 GABARAPL1Q9H0R8 117 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 RNF167Q9H6Y7 350 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 RXFP3Q9NSD7 469 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 PLCXD1Q9NUJ7 323 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 PCDH10Q9P2E7 1040 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 AK6Q9Y3D8 172 aaKnown RBP11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 BOLA1Q9Y3E2 137 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 CACNG2Q9Y698 323 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 ABCA3Q99758 1704 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 C11orf98E9PRG8 122 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 NDUFB2O95178 105 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 RNH1P13489 461 aaKnown RBP11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 FOSL2P15408 326 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 C5AR1P21730 350 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 FNTBP49356 437 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 EIF5AP63241 154 aaKnown RBP11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 CDK3Q00526 305 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 CHRNEQ04844 493 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 MRPL58Q14197 206 aaKnown RBP11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 TP53I3Q53FA7 332 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 ACSM3Q53FZ2 586 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 SLX4IPQ5VYV7 408 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 GLT8D1Q68CQ7 371 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 KCTD18Q6PI47 426 aaPredicted RBP11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 BCDIN3DQ7Z5W3 292 aaKnown RBP11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 LRRC56Q8IYG6 542 aaPredicted RBP11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 WBP2Q969T9 261 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 MMABQ96EY8 250 aaPredicted RBP11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 NT5DC2Q9H857 520 aa11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 USP36Q9P275 1121 aaKnown RBP11.97□□□□□ -0.49
DNMT3A-204ENST00000380756 ADAMTSL1Q8N6G6 1762 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 HYKKA2RU49 373 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 HCRTR2O43614 444 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 CD3GP09693 182 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 GKN3PP0CG01 181 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 GABRA5P31644 462 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 TGFBR1P36897 503 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 NRG3P56975 720 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 RUNX3Q13761 415 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 RHNO1Q9BSD3 238 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 SPATA6Q9NWH7 488 aaPredicted RBP11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 TEX10Q9NXF1 929 aaPredicted RBP11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 SOX1O00570 391 aaPredicted RBP11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 KCNJ13O60928 360 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 ABLIM3O94929 683 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 CYB5AP00167 134 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 SPARCP09486 303 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 ART1P52961 327 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 KCNJ10P78508 379 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 INAVAQ3KP66 663 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 FAM71E1Q6IPT2 247 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 SLC29A4Q7RTT9 530 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 OR7D2Q96RA2 312 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 MNTQ99583 582 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 C1QTNF2Q9BXJ5 285 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.96□□□□□ -0.494e-7■■■■□ 21
DNMT3A-204ENST00000380756 QRSL1Q9H0R6 528 aaKnown RBP11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 OR51J1Q9H342 316 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 SEC61A2Q9H9S3 476 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 ACER3Q9NUN7 267 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 RBFOX1Q9NWB1 397 aaKnown RBP11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 KLHL9Q9P2J3 617 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 MCM3APO60318 1980 aa11.96□□□□□ -0.49
DNMT3A-204ENST00000380756 TMEM202A6NGA9 273 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 GABRPO00591 440 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 RPS19P39019 145 aaKnown RBP11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 SLC1A3P43003 542 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 KCNJ5P48544 419 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 RPS25P62851 125 aaKnown RBP11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 NKX3-2P78367 333 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 SCRN3Q0VDG4 424 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 ENTPD8Q5MY95 495 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 HES5Q5TA89 166 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 TMEM17Q86X19 198 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 LRRC28Q86X40 367 aaPredicted RBP11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 OR2L3Q8NG85 312 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 CASTOR1Q8WTX7 329 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 BPIFA2Q96DR5 249 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 VNN3Q9NY84 501 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 DIMT1Q9UNQ2 313 aaKnown RBP11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 PLEKHA6Q9Y2H5 1048 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 CSO75390 466 aaKnown RBP11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 RFPL3O75679 317 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms