RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 RBX1P62877 108 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 CCL14Q16627 93 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 TECRLQ5HYJ1 363 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 ZNF385CQ66K41 422 aaPredicted RBP8.8□□□□□ -1
PTPRA-204ENST00000380393 MZT2AQ6P582 158 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 Q6ZTK2 550 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 CAMKMTQ7Z624 323 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 TMEM135Q86UB9 458 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 NPAS3Q8IXF0 933 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 PHACTR4Q8IZ21 702 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 SLC44A3Q8N4M1 653 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 FUBP3Q96I24 572 aaKnown RBP eCLIP8.8□□□□□ -12e-19■■■□□ 15.3
PTPRA-204ENST00000380393 CYP2S1Q96SQ9 504 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 TMPRSS13Q9BYE2 586 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 EGLN1Q9GZT9 426 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 TUBB1Q9H4B7 451 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 WDR26Q9H7D7 661 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 PIPOXQ9P0Z9 390 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 ZDHHC8Q9ULC8 765 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 STARD10Q9Y365 291 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 EVPLQ92817 2033 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 ZNF705EA8MWA4 302 aaPredicted RBP8.8□□□□□ -1
PTPRA-204ENST00000380393 GALR3O60755 368 aaPredicted RBP8.8□□□□□ -1
PTPRA-204ENST00000380393 EFCAB14O75071 495 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 NXPH2O95156 264 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 HOXC6P09630 235 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 GIPP09681 153 aaPredicted RBP8.8□□□□□ -1
PTPRA-204ENST00000380393 AHCYP23526 432 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 SHC1P29353 583 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 CEACAM6P40199 344 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 CSRP3P50461 194 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 SLC6A3Q01959 620 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 ARHGAP19Q14CB8 494 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 TMEM71Q6P5X7 295 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 SPATA19Q7Z5L4 167 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 RANBP3LQ86VV4 465 aaPredicted RBP8.8□□□□□ -1
PTPRA-204ENST00000380393 ZBTB8OSQ8IWT0 167 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 BMPERQ8N8U9 685 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 C1orf127Q8N9H9 656 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 DNAAF1Q8NEP3 725 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 CHST13Q8NET6 341 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 C16orf78Q8WTQ4 265 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 ACOT12Q8WYK0 555 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 FAM83CQ9BQN1 747 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 NDUFAF3Q9BU61 184 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 STYXL1Q9Y6J8 313 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 IMPA2O14732 288 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 TNFRSF10BO14763 440 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 HCRTO43612 131 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 MT-ND4LP03901 98 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 MYOGP15173 224 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 CPT2P23786 658 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 CERS1P27544 350 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 CACNB2Q08289 660 aaPredicted RBP8.8□□□□□ -1
PTPRA-204ENST00000380393 PWP1Q13610 501 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 RAB12Q6IQ22 244 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 MOB3CQ70IA8 216 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 LRRTM1Q86UE6 522 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 TMEM200AQ86VY9 491 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 SLITRK4Q8IW52 837 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 DENND6BQ8NEG7 585 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 OR8J3Q8NGG0 315 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 OR8J2Q8NGG1 315 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 NPRL2Q8WTW4 380 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 ORAI1Q96D31 301 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 WDR89Q96FK6 387 aaPredicted RBP8.8□□□□□ -1
PTPRA-204ENST00000380393 ZDHHC5Q9C0B5 715 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 BRINP2Q9C0B6 783 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 SLC6A16Q9GZN6 736 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 CA10Q9NS85 328 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 GDF2Q9UK05 429 aaPredicted RBP8.8□□□□□ -1
PTPRA-204ENST00000380393 CILPO75339 1184 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 NCR1O76036 304 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 MLYCDO95822 493 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 GSTP1P09211 210 aaKnown RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 AP3S2P59780 193 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 SIM1P81133 766 aaPredicted RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 C1DQ13901 141 aaKnown RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 TGIF1Q15583 401 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 ADAM5Q6NVV9 412 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 GDPD4Q6W3E5 623 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 GPR65Q8IYL9 337 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 OR56B4Q8NH76 319 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 PIGKQ92643 395 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 RSC1A1Q92681 617 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 CPNE2Q96FN4 548 aaPredicted RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 MRGPRX4Q96LA9 322 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 OR51V1Q9H2C8 321 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 IKZF5Q9H5V7 419 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 EPHX3Q9H6B9 360 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 EIF2B3Q9NR50 452 aaKnown RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 H2AFY2Q9P0M6 372 aaPredicted RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 SIX4Q9UIU6 781 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 FZD4Q9ULV1 537 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 MRPS18CQ9Y3D5 142 aaKnown RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 A0A087WZ62 844 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 A0A1B0GVC2 190 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.79□□□□□ -1
PTPRA-204ENST00000380393 A6NIN4 97 aa8.79□□□□□ -1
PTPRA-204ENST00000380393 A6NLC8 198 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms